merge in Bastian M. Wojek's cpp-version of msr2data. This should help to step towards a real platform independent musrfit package.
This commit is contained in:
nemu
799
src/classes/PMsr2Data.cpp
Normal file
799
src/classes/PMsr2Data.cpp
Normal file
@ -0,0 +1,799 @@
|
||||
/***************************************************************************
|
||||
|
||||
PMsr2Data.cpp
|
||||
|
||||
Author: Bastian M. Wojek / Andreas Suter
|
||||
e-mail: andreas.suter@psi.ch
|
||||
|
||||
$Id$
|
||||
|
||||
***************************************************************************/
|
||||
|
||||
/***************************************************************************
|
||||
* Copyright (C) 2009 by Bastian M. Wojek / Andreas Suter *
|
||||
* andreas.suter@psi.ch *
|
||||
* *
|
||||
* This program is free software; you can redistribute it and/or modify *
|
||||
* it under the terms of the GNU General Public License as published by *
|
||||
* the Free Software Foundation; either version 2 of the License, or *
|
||||
* (at your option) any later version. *
|
||||
* *
|
||||
* This program is distributed in the hope that it will be useful, *
|
||||
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
|
||||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
|
||||
* GNU General Public License for more details. *
|
||||
* *
|
||||
* You should have received a copy of the GNU General Public License *
|
||||
* along with this program; if not, write to the *
|
||||
* Free Software Foundation, Inc., *
|
||||
* 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. *
|
||||
***************************************************************************/
|
||||
|
||||
#include <cctype>
|
||||
#include <sstream>
|
||||
#include <fstream>
|
||||
#include <iomanip>
|
||||
using namespace std;
|
||||
|
||||
#include <boost/algorithm/string/trim.hpp> // for stripping leading whitespace in std::string
|
||||
#include <boost/algorithm/string/case_conv.hpp> // for to_lower() in std::string
|
||||
#include <boost/algorithm/string/split.hpp> // split strings at certain characters
|
||||
using namespace boost::algorithm;
|
||||
|
||||
#include "PMsr2Data.h"
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p> Write formatted output to file
|
||||
*/
|
||||
void writeValues(ofstream &outFile, const double &value, const unsigned int &width)
|
||||
{
|
||||
if (fabs(value) >= 1.0e6 || (fabs(value) < 1.0e-4 && fabs(value) > 0.0))
|
||||
outFile << scientific << setprecision(width - 8);
|
||||
else
|
||||
outFile.setf(ios::floatfield);
|
||||
outFile << setw(width) << left << value;
|
||||
return;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
PMsr2Data::PMsr2Data(const string &ext) : fFileExtension(ext), fRunListFile(false)
|
||||
{
|
||||
fRunVector.clear();
|
||||
fRunVectorIter = fRunVector.end();
|
||||
fRunListFileStream = 0;
|
||||
fSaxParser = 0;
|
||||
fStartupHandler = 0;
|
||||
fDataHandler = 0;
|
||||
fMsrHandler = 0;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
PMsr2Data::~PMsr2Data()
|
||||
{
|
||||
fRunVector.clear();
|
||||
fRunVectorIter = fRunVector.end();
|
||||
fIndVar.clear();
|
||||
|
||||
if (fRunListFileStream) {
|
||||
fRunListFileStream->close();
|
||||
delete fRunListFileStream;
|
||||
fRunListFileStream = 0;
|
||||
}
|
||||
if (fSaxParser) {
|
||||
delete fSaxParser;
|
||||
fSaxParser = 0;
|
||||
}
|
||||
if (fStartupHandler) {
|
||||
delete fStartupHandler;
|
||||
fStartupHandler = 0;
|
||||
}
|
||||
if (fDataHandler) {
|
||||
delete fDataHandler;
|
||||
fDataHandler = 0;
|
||||
}
|
||||
if (fMsrHandler) {
|
||||
delete fMsrHandler;
|
||||
fMsrHandler = 0;
|
||||
}
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
unsigned int PMsr2Data::GetPresentRun() const
|
||||
{
|
||||
if (fRunVectorIter != fRunVector.end())
|
||||
return *fRunVectorIter;
|
||||
else
|
||||
return 0;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
int PMsr2Data::SetRunNumbers(unsigned int runNo)
|
||||
{
|
||||
if (runNo > 9999 || runNo < 1)
|
||||
return 1;
|
||||
|
||||
fRunVector.clear();
|
||||
fRunVector.push_back(runNo);
|
||||
fRunVectorIter = fRunVector.begin();
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
int PMsr2Data::SetRunNumbers(unsigned int runNoStart, unsigned int runNoEnd)
|
||||
{
|
||||
if ((runNoStart > 9999) || (runNoEnd > 9999) || (runNoStart < 1) || (runNoEnd < 1))
|
||||
return 1;
|
||||
|
||||
fRunVector.clear();
|
||||
if (runNoStart <= runNoEnd) {
|
||||
for (unsigned int i(runNoStart); i<=runNoEnd; ++i)
|
||||
fRunVector.push_back(i);
|
||||
} else {
|
||||
for (unsigned int i(runNoStart); i>=runNoEnd; --i)
|
||||
fRunVector.push_back(i);
|
||||
}
|
||||
fRunVectorIter = fRunVector.begin();
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
int PMsr2Data::SetRunNumbers(const vector<unsigned int> &runListVector)
|
||||
{
|
||||
if (runListVector.empty())
|
||||
return -1;
|
||||
|
||||
for (vector<unsigned int>::const_iterator iter(runListVector.begin()); iter!=runListVector.end(); iter++) {
|
||||
if (*iter > 9999 || *iter < 1)
|
||||
return 1;
|
||||
}
|
||||
|
||||
fRunVector = runListVector;
|
||||
fRunVectorIter = fRunVector.begin();
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
int PMsr2Data::SetRunNumbers(const string &runListFile)
|
||||
{
|
||||
fRunVector.clear();
|
||||
|
||||
ifstream in(runListFile.c_str());
|
||||
if (!in) {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: **ERROR** The runlist file " << runListFile << " cannot be opened! Please check!" << endl;
|
||||
return -1;
|
||||
}
|
||||
|
||||
string line, indvar;
|
||||
istringstream strLine;
|
||||
vector<string> splitVec;
|
||||
unsigned int cntr(0);
|
||||
unsigned int runNo;
|
||||
|
||||
while (getline(in, line)) {
|
||||
trim(line);
|
||||
if (line.empty())
|
||||
continue;
|
||||
else if (line.at(0) == '#')
|
||||
continue;
|
||||
else
|
||||
cntr++;
|
||||
|
||||
split( splitVec, line, is_any_of("#") ); // split the string if any comments appear on the line
|
||||
|
||||
if (cntr == 1) { // Read in the names of the independent variables in the runlist file
|
||||
strLine.clear();
|
||||
strLine.str(splitVec[0]);
|
||||
strLine >> indvar; // "RUN"
|
||||
if (indvar.compare("RUN")) {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: **ERROR** The format of the runlist file " << runListFile << " is not correct! Please check!" << endl;
|
||||
}
|
||||
while (strLine >> indvar)
|
||||
fIndVar.push_back(indvar);
|
||||
}
|
||||
|
||||
if (cntr > 1) {
|
||||
strLine.clear();
|
||||
strLine.str(splitVec[0]);
|
||||
strLine >> runNo;
|
||||
if (runNo > 9999 || runNo < 1)
|
||||
return 1;
|
||||
fRunVector.push_back(runNo);
|
||||
}
|
||||
|
||||
splitVec.clear();
|
||||
}
|
||||
|
||||
in.close();
|
||||
fRunVectorIter = fRunVector.begin();
|
||||
fRunListFile = true;
|
||||
fRunListFileStream = new ifstream(runListFile.c_str());
|
||||
return 0;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
int PMsr2Data::ParseXmlStartupFile()
|
||||
{
|
||||
int status;
|
||||
fSaxParser = new TSAXParser();
|
||||
fStartupHandler = new PStartupHandler();
|
||||
string startup_path_name(fStartupHandler->GetStartupFilePath().Data());
|
||||
fSaxParser->ConnectToHandler("PStartupHandler", fStartupHandler);
|
||||
status = fSaxParser->ParseFile(startup_path_name.c_str());
|
||||
// check for parse errors
|
||||
if (status) { // error
|
||||
cout << endl << ">> msr2data: **WARNING** reading/parsing musrfit_startup.xml." << endl;
|
||||
// clean up
|
||||
if (fSaxParser) {
|
||||
delete fSaxParser;
|
||||
fSaxParser = 0;
|
||||
}
|
||||
if (fStartupHandler) {
|
||||
delete fStartupHandler;
|
||||
fStartupHandler = 0;
|
||||
}
|
||||
}
|
||||
return status;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
int PMsr2Data::ReadMsrFile(const string &infile)
|
||||
{
|
||||
int status;
|
||||
fMsrHandler = new PMsrHandler(infile.c_str());
|
||||
status = fMsrHandler->ReadMsrFile();
|
||||
if (status != PMUSR_SUCCESS) {
|
||||
switch (status) {
|
||||
case PMUSR_MSR_FILE_NOT_FOUND:
|
||||
cout << endl << ">> msr2data: **ERROR** Could not find " << infile << endl;
|
||||
break;
|
||||
case PMUSR_MSR_SYNTAX_ERROR:
|
||||
cout << endl << ">> msr2data: **SYNTAX ERROR** in file " << infile << ", full stop here." << endl;
|
||||
break;
|
||||
default:
|
||||
cout << endl << ">> msr2data: **UNKOWN ERROR** when trying to read the msr-file" << endl;
|
||||
break;
|
||||
}
|
||||
}
|
||||
return status;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
bool PMsr2Data::ReadRunDataFile()
|
||||
{
|
||||
if (fStartupHandler)
|
||||
fDataHandler = new PRunDataHandler(fMsrHandler, fStartupHandler->GetDataPathList());
|
||||
else
|
||||
fDataHandler = new PRunDataHandler(fMsrHandler);
|
||||
|
||||
bool success = fDataHandler->IsAllDataAvailable();
|
||||
if (!success) {
|
||||
cout << endl << ">> msr2data: **WARNING** Could not read all data files, will continue without the data file information..." << endl;
|
||||
delete fDataHandler;
|
||||
fDataHandler = 0;
|
||||
}
|
||||
return success;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
bool PMsr2Data::PrepareNewInputFile(unsigned int tempRun) const
|
||||
{
|
||||
if (fRunVectorIter == fRunVector.end())
|
||||
return false;
|
||||
|
||||
if (*fRunVectorIter == tempRun)
|
||||
return true;
|
||||
|
||||
const int N(4); // number of digits for the runnumber
|
||||
|
||||
ostringstream strInfile;
|
||||
strInfile << tempRun << fFileExtension << ".msr";
|
||||
ifstream in(strInfile.str().c_str());
|
||||
if (!in) {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: **ERROR** The template msr-file " << strInfile.str() << " cannot be opened! Please check!" << endl;
|
||||
return false;
|
||||
}
|
||||
ostringstream strOutfile;
|
||||
strOutfile << *fRunVectorIter << fFileExtension << ".msr";
|
||||
ofstream out(strOutfile.str().c_str());
|
||||
if (!out) {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: **ERROR** The new msr file " << strOutfile.str() << " cannot be opened! Please check!" << endl;
|
||||
return false;
|
||||
}
|
||||
|
||||
ostringstream tempRunNumber;
|
||||
tempRunNumber.fill('0');
|
||||
tempRunNumber.setf(ios::internal, ios::adjustfield);
|
||||
tempRunNumber.width(N);
|
||||
tempRunNumber << tempRun;
|
||||
|
||||
ostringstream newRunNumber;
|
||||
newRunNumber.fill('0');
|
||||
newRunNumber.setf(ios::internal, ios::adjustfield);
|
||||
newRunNumber.width(N);
|
||||
newRunNumber << *fRunVectorIter;
|
||||
|
||||
cout << endl << ">> msr2data: **INFO** Generating new input msr file " << strOutfile.str() << endl;
|
||||
|
||||
string line, firstOnLine;
|
||||
istringstream strLine;
|
||||
|
||||
// write the run number in the TITLE line of the msr-file (is overwritten later by musrfit if called with the -t option)
|
||||
getline(in, line);
|
||||
out << *fRunVectorIter << endl;
|
||||
|
||||
while (getline(in, line)) {
|
||||
if (line.empty()) {
|
||||
out << endl;
|
||||
continue;
|
||||
}
|
||||
if (!line.compare("SET BATCH") || !line.compare("END RETURN"))
|
||||
continue;
|
||||
|
||||
strLine.clear();
|
||||
strLine.str(line);
|
||||
strLine >> firstOnLine;
|
||||
if (!firstOnLine.compare("RUN")) {
|
||||
string::size_type loc = line.rfind(tempRunNumber.str());
|
||||
if ( loc != string::npos ) {
|
||||
line.replace(loc, N, newRunNumber.str());
|
||||
} else {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: **WARNING** The template run file number does not match the \"file index\"" << endl;
|
||||
cout << ">> msr2data: **WARNING** Unexpected things may happen... (for sure)" << endl;
|
||||
}
|
||||
}
|
||||
out << line << endl;
|
||||
}
|
||||
in.close();
|
||||
out.close();
|
||||
return true;
|
||||
}
|
||||
|
||||
//-------------------------------------------------------------
|
||||
/**
|
||||
* <p>
|
||||
*/
|
||||
void PMsr2Data::WriteOutput(const string &outfile, bool db, bool withHeader) const
|
||||
{
|
||||
if (!to_lower_copy(outfile).compare("none")) {
|
||||
fRunVectorIter++;
|
||||
return;
|
||||
}
|
||||
|
||||
string msrTitle(fMsrHandler->GetMsrTitle()->Data());
|
||||
string msrFileName(fMsrHandler->GetFileName().Data());
|
||||
unsigned int msrNoOfParams(fMsrHandler->GetNoOfParams());
|
||||
PMsrParamList *msrParamList(fMsrHandler->GetMsrParamList());
|
||||
|
||||
vector<string> dataParamNames;
|
||||
vector<string> dataParamLabels;
|
||||
vector<double> dataParam, dataParamErr;
|
||||
|
||||
if (fDataHandler) {
|
||||
PMsrRunList *msrRunList(fMsrHandler->GetMsrRunList());
|
||||
PRawRunData *rawRunData(fDataHandler->GetRunData((*msrRunList)[0].fRunName[0]));
|
||||
|
||||
switch (rawRunData->fTemp.size()) {
|
||||
case 1:
|
||||
dataParamNames.push_back("dataT");
|
||||
dataParamLabels.push_back("T (K)");
|
||||
dataParam.push_back(rawRunData->fTemp[0].first);
|
||||
dataParamErr.push_back(rawRunData->fTemp[0].second);
|
||||
break;
|
||||
default:
|
||||
ostringstream oss;
|
||||
for (unsigned int i(0); i<rawRunData->fTemp.size(); i++) {
|
||||
oss << "dataT" << i;
|
||||
dataParamNames.push_back(oss.str());
|
||||
oss.str("");
|
||||
oss << "T" << i << " (K)";
|
||||
dataParamLabels.push_back(oss.str());
|
||||
oss.str("");
|
||||
dataParam.push_back(rawRunData->fTemp[i].first);
|
||||
dataParamErr.push_back(rawRunData->fTemp[i].second);
|
||||
}
|
||||
break;
|
||||
}
|
||||
|
||||
double value;
|
||||
value = rawRunData->fField;
|
||||
if (value != -9.9e99) {
|
||||
dataParamNames.push_back("dataB");
|
||||
dataParamLabels.push_back("mu0 H (G)");
|
||||
dataParam.push_back(value);
|
||||
}
|
||||
|
||||
value = rawRunData->fEnergy;
|
||||
if (value != -999.0) {
|
||||
dataParamNames.push_back("dataE");
|
||||
dataParamLabels.push_back("Implantation Energy (keV)");
|
||||
dataParam.push_back(value);
|
||||
}
|
||||
|
||||
value = rawRunData->fTransport;
|
||||
if (value != -999.0) {
|
||||
dataParamNames.push_back("dataTr");
|
||||
dataParamLabels.push_back("Transport (kV)");
|
||||
dataParam.push_back(value);
|
||||
}
|
||||
|
||||
vector<double> ra(rawRunData->fRingAnode);
|
||||
if (ra.size() > 1) {
|
||||
dataParamNames.push_back("dataRALRAR");
|
||||
dataParamLabels.push_back("RAL-RAR (kV)");
|
||||
dataParam.push_back(ra[0]-ra[1]);
|
||||
}
|
||||
if (ra.size() == 4) {
|
||||
dataParamNames.push_back("dataRATRAB");
|
||||
dataParamLabels.push_back("RAT-RAB (kV)");
|
||||
dataParam.push_back(ra[2]-ra[3]);
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
// get the independent variable values from the runlist file if needed
|
||||
vector<double> indVarValues;
|
||||
|
||||
if (fRunListFile) {
|
||||
string line;
|
||||
vector<string> splitVec;
|
||||
unsigned int runNo;
|
||||
double val;
|
||||
istringstream strLine;
|
||||
|
||||
while (getline(*fRunListFileStream, line)) {
|
||||
trim(line);
|
||||
if (line.empty())
|
||||
continue;
|
||||
else if (line.at(0) == '#' || !line.substr(0,3).compare("RUN"))
|
||||
continue;
|
||||
else {
|
||||
split( splitVec, line, is_any_of("#") ); // split the string if any comments appear on the line
|
||||
strLine.clear();
|
||||
strLine.str(splitVec[0]);
|
||||
strLine >> runNo;
|
||||
if (runNo != *fRunVectorIter) {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: **ERROR** The run number in the runlist file does not match the one which should be processed..." << endl;
|
||||
cout << ">> msr2data: **ERROR** Something is very strange... Please report this bug!" << endl;
|
||||
fRunVectorIter = fRunVector.end();
|
||||
return;
|
||||
}
|
||||
while (strLine >> val) {
|
||||
indVarValues.push_back(val);
|
||||
}
|
||||
if (indVarValues.size() != fIndVar.size()) {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: **ERROR** The number of data entries in the runlist file for the run number " << runNo << endl;
|
||||
cout << ">> msr2data: **ERROR** does not match the number of labels given in the RUN-line! Please check the file!" << endl;
|
||||
fRunVectorIter = fRunVector.end();
|
||||
return;
|
||||
}
|
||||
break;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
// The RUNLIST file stream and the run vector iterator might get out of synchronization, if the following check is placed before the above block...
|
||||
PMsrStatisticStructure *msrStatistic(fMsrHandler->GetMsrStatistic());
|
||||
if (!msrStatistic->fValid) {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: **WARNING** The fit of run " << *fRunVectorIter << " has not converged!" << endl;
|
||||
cout << ">> msr2data: **WARNING** Its parameter data have not been appended to the output file " << outfile << endl;
|
||||
fRunVectorIter++;
|
||||
|
||||
delete fMsrHandler;
|
||||
fMsrHandler = 0;
|
||||
|
||||
if (fDataHandler) {
|
||||
delete fDataHandler;
|
||||
fDataHandler = 0;
|
||||
}
|
||||
|
||||
// clean up some vectors
|
||||
dataParamNames.clear();
|
||||
dataParamLabels.clear();
|
||||
dataParam.clear();
|
||||
dataParamErr.clear();
|
||||
indVarValues.clear();
|
||||
|
||||
return;
|
||||
}
|
||||
|
||||
// open the DB or dat file and write the data
|
||||
|
||||
ofstream outFile(outfile.c_str(), ios::app);
|
||||
if (!outFile) {
|
||||
cout << endl;
|
||||
cout << ">> msr2data: The output file " << outfile << " cannot be opened! Please check!" << endl;
|
||||
fRunVectorIter = fRunVector.end();
|
||||
return;
|
||||
}
|
||||
|
||||
if (db) {
|
||||
|
||||
if (withHeader && (fRunVectorIter == fRunVector.begin())) {
|
||||
outFile << "TITLE" << endl;
|
||||
outFile << ">>>Put your title here<<<" << endl << endl;
|
||||
outFile << "Abstract" << endl;
|
||||
outFile << ">>>Put your abstract here<<<" << endl << endl;
|
||||
outFile << "LABELS" << endl;
|
||||
|
||||
if (fDataHandler) {
|
||||
for (unsigned int i(0); i < dataParamLabels.size(); ++i) {
|
||||
outFile << dataParamLabels[i] << endl;
|
||||
}
|
||||
}
|
||||
|
||||
if (fRunListFile) {
|
||||
for (unsigned int i(0); i < fIndVar.size(); ++i) {
|
||||
outFile << fIndVar[i] << endl;
|
||||
}
|
||||
}
|
||||
|
||||
for (unsigned int i(0); i < msrNoOfParams; ++i) {
|
||||
outFile << (*msrParamList)[i].fName.Data() << endl;
|
||||
}
|
||||
|
||||
if (msrStatistic->fChisq)
|
||||
outFile << "CHISQ" << endl;
|
||||
else
|
||||
outFile << "maxLH" << endl;
|
||||
|
||||
outFile << "NDF" << endl;
|
||||
|
||||
if (msrStatistic->fChisq)
|
||||
outFile << "CHISQred" << endl;
|
||||
else
|
||||
outFile << "maxLHred" << endl;
|
||||
|
||||
outFile << "RUN" << endl;
|
||||
|
||||
outFile << endl << "Data";
|
||||
|
||||
if (fDataHandler) {
|
||||
for (unsigned int i(0); i < dataParamNames.size(); ++i) {
|
||||
outFile << " " << dataParamNames[i];
|
||||
}
|
||||
}
|
||||
|
||||
if (fRunListFile) {
|
||||
for (unsigned int i(0); i < fIndVar.size(); ++i) {
|
||||
outFile << " " << fIndVar[i];
|
||||
}
|
||||
}
|
||||
|
||||
for (unsigned int i(0); i < msrNoOfParams; ++i) {
|
||||
outFile << " " << (*msrParamList)[i].fName.Data();
|
||||
}
|
||||
|
||||
if (msrStatistic->fChisq)
|
||||
outFile << " " << "CHISQ";
|
||||
else
|
||||
outFile << " " << "maxLH";
|
||||
|
||||
outFile << " " << "NDF";
|
||||
|
||||
if (msrStatistic->fChisq)
|
||||
outFile << " " << "CHISQred";
|
||||
else
|
||||
outFile << " " << "maxLHred";
|
||||
|
||||
outFile << " " << "RUN" << endl;
|
||||
|
||||
outFile << "\\-e" << endl;
|
||||
}
|
||||
|
||||
if (fDataHandler) {
|
||||
for (unsigned int i(0); i < dataParam.size(); ++i) {
|
||||
if (i < dataParamErr.size())
|
||||
outFile << dataParamNames[i] << " = " << dataParam[i] << ", " \
|
||||
<< dataParamErr[i] << ", " << dataParamErr[i] << ",\\" << endl;
|
||||
else
|
||||
outFile << dataParamNames[i] << " = " << dataParam[i] << ", 0, 0,\\" << endl;
|
||||
}
|
||||
}
|
||||
|
||||
if (fRunListFile) {
|
||||
for (unsigned int i(0); i < indVarValues.size(); ++i) {
|
||||
outFile << fIndVar[i] << " = " << indVarValues[i] << ", 0, 0,\\" << endl;
|
||||
}
|
||||
}
|
||||
|
||||
for (unsigned int i(0); i < msrNoOfParams; ++i) {
|
||||
outFile << (*msrParamList)[i].fName.Data() << " = " << (*msrParamList)[i].fValue << ", ";
|
||||
if ((*msrParamList)[i].fPosErrorPresent)
|
||||
outFile << (*msrParamList)[i].fPosError << ", ";
|
||||
else
|
||||
outFile << fabs((*msrParamList)[i].fStep) << ", ";
|
||||
outFile << fabs((*msrParamList)[i].fStep) << ",\\" << endl;
|
||||
}
|
||||
|
||||
if (msrStatistic->fChisq)
|
||||
outFile << "CHISQ = " << msrStatistic->fMin << ", 0, 0,\\" << endl;
|
||||
else
|
||||
outFile << "maxLH = " << msrStatistic->fMin << ", 0, 0,\\" << endl;
|
||||
|
||||
outFile << "NDF = " << msrStatistic->fNdf << ", 0, 0,\\" << endl;
|
||||
|
||||
if (msrStatistic->fChisq)
|
||||
outFile << "CHISQred = " << msrStatistic->fMin/msrStatistic->fNdf << ", 0, 0,\\" << endl;
|
||||
else
|
||||
outFile << "maxLHred = " << msrStatistic->fMin/msrStatistic->fNdf << ", 0, 0,\\" << endl;
|
||||
|
||||
outFile << *fRunVectorIter << ",,, " << msrTitle << endl;
|
||||
|
||||
} else { // no DB file but ASCII file with data columns
|
||||
|
||||
unsigned int length(0), maxlength(12);
|
||||
for (unsigned int i(0); i < dataParamNames.size(); ++i) {
|
||||
length = dataParamNames[i].length();
|
||||
if (length > maxlength)
|
||||
maxlength = length;
|
||||
}
|
||||
for (unsigned int i(0); i < fIndVar.size(); ++i) {
|
||||
length = fIndVar[i].length();
|
||||
if (length > maxlength)
|
||||
maxlength = length;
|
||||
}
|
||||
string s;
|
||||
for (unsigned int i(0); i < msrNoOfParams; ++i) {
|
||||
s = (*msrParamList)[i].fName.Data();
|
||||
length = s.length();
|
||||
if (length > maxlength)
|
||||
maxlength = length;
|
||||
}
|
||||
|
||||
if (maxlength < 13)
|
||||
maxlength = 13; // will use a minimum field width of 13 which corresponds to: -1.23456e-07 + ' '
|
||||
else
|
||||
maxlength += 1; // maximum length of parameter names + ' '
|
||||
|
||||
if (withHeader && (fRunVectorIter == fRunVector.begin())) {
|
||||
|
||||
if (fDataHandler) {
|
||||
for (unsigned int i(0); i < dataParamNames.size(); ++i) {
|
||||
s = dataParamNames[i];
|
||||
if (i < dataParamErr.size()) {
|
||||
outFile << setw(maxlength) << left << s << setw(maxlength + 3) << left << s + "Err";
|
||||
} else
|
||||
outFile << setw(maxlength) << left << s;
|
||||
}
|
||||
}
|
||||
|
||||
if (fRunListFile) {
|
||||
for (unsigned int i(0); i < fIndVar.size(); ++i) {
|
||||
outFile << setw(maxlength) << left << fIndVar[i];
|
||||
}
|
||||
}
|
||||
|
||||
for (unsigned int i(0); i < msrNoOfParams; ++i) {
|
||||
s = (*msrParamList)[i].fName.Data();
|
||||
outFile << setw(maxlength) << left << s \
|
||||
<< setw(maxlength + 6) << left << s + "PosErr" \
|
||||
<< setw(maxlength + 6) << left << s + "NegErr";
|
||||
}
|
||||
s.clear();
|
||||
|
||||
if (msrStatistic->fChisq)
|
||||
outFile << setw(maxlength) << left << "CHISQ";
|
||||
else
|
||||
outFile << setw(maxlength) << left << "maxLH";
|
||||
|
||||
outFile << setw(maxlength) << left << "NDF";
|
||||
|
||||
if (msrStatistic->fChisq)
|
||||
outFile << setw(maxlength) << left << "CHISQred";
|
||||
else
|
||||
outFile << setw(maxlength) << left << "maxLHred";
|
||||
|
||||
outFile << setw(maxlength) << left << "RUN" << endl;
|
||||
}
|
||||
|
||||
if (fDataHandler) {
|
||||
for (unsigned int i(0); i < dataParam.size(); ++i) {
|
||||
if (i < dataParamErr.size()) {
|
||||
writeValues(outFile, dataParam[i], maxlength);
|
||||
writeValues(outFile, dataParamErr[i], maxlength + 3);
|
||||
} else {
|
||||
writeValues(outFile, dataParam[i], maxlength);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
if (fRunListFile) {
|
||||
for (unsigned int i(0); i < indVarValues.size(); ++i) {
|
||||
writeValues(outFile, indVarValues[i], maxlength);
|
||||
}
|
||||
}
|
||||
|
||||
for (unsigned int i(0); i < msrNoOfParams; ++i) {
|
||||
writeValues(outFile, (*msrParamList)[i].fValue, maxlength);
|
||||
|
||||
if ((*msrParamList)[i].fPosErrorPresent)
|
||||
writeValues(outFile, (*msrParamList)[i].fPosError, maxlength + 6);
|
||||
else
|
||||
writeValues(outFile, fabs((*msrParamList)[i].fStep), maxlength + 6);
|
||||
|
||||
writeValues(outFile, fabs((*msrParamList)[i].fStep), maxlength + 6);
|
||||
}
|
||||
|
||||
writeValues(outFile, msrStatistic->fMin, maxlength);
|
||||
|
||||
writeValues(outFile, msrStatistic->fNdf, maxlength);
|
||||
|
||||
writeValues(outFile, msrStatistic->fMin/msrStatistic->fNdf, maxlength);
|
||||
|
||||
writeValues(outFile, *fRunVectorIter, maxlength);
|
||||
outFile << endl;
|
||||
|
||||
}
|
||||
|
||||
cout << endl << ">> msr2data: **INFO** Parameter data of file " << msrFileName << " have been appended to " << outfile << endl;
|
||||
|
||||
fRunVectorIter++;
|
||||
|
||||
if (fRunVectorIter == fRunVector.end())
|
||||
outFile << endl << endl;
|
||||
outFile.close();
|
||||
|
||||
delete fMsrHandler;
|
||||
fMsrHandler = 0;
|
||||
|
||||
if (fDataHandler) {
|
||||
delete fDataHandler;
|
||||
fDataHandler = 0;
|
||||
}
|
||||
|
||||
// clean up some vectors
|
||||
dataParamNames.clear();
|
||||
dataParamLabels.clear();
|
||||
dataParam.clear();
|
||||
dataParamErr.clear();
|
||||
indVarValues.clear();
|
||||
|
||||
return;
|
||||
|
||||
}
|
||||
|
||||
Reference in New Issue
Block a user