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ADD: RHEL unstable add FASTQC, cellranger@8.0.1, sratoolkit@3.1.1, star

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svcusr-spack (Resp. Germann Elsa Sylvia)
2024-07-04 15:48:47 +02:00
parent 1aa32870f5
commit 87519e4e79
2 changed files with 9 additions and 1 deletions
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2
env/rhel7/x86_64/admin/unstable/spack.lock vendored
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8
env/rhel7/x86_64/admin/unstable/spack.yaml vendored
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@ -9,6 +9,11 @@ spack:
install_tree: install_tree:
root: $spack/opt/spack/unstable root: $spack/opt/spack/unstable
definitions: definitions:
- gcc_12.3.0:
- fastqc@0.12.1/dkkcfu5
- star@2.7.11a/icumpki
- cellranger@8.0.1/6h63gxx
- sratoolkit@3.1.1/2szh2jy
- gcc_12.3.0_openmpi: - gcc_12.3.0_openmpi:
- cp2k@2024.1/2bayb45 # ~cuda - cp2k@2024.1/2bayb45 # ~cuda
- cp2k@2024.1/exkrpix # +cuda - cp2k@2024.1/exkrpix # +cuda
@ -25,6 +30,9 @@ spack:
local_unstable: file:///afs/psi.ch/software/spack/unstable local_unstable: file:///afs/psi.ch/software/spack/unstable
local_stable: file:///afs/psi.ch/software/spack/stable local_stable: file:///afs/psi.ch/software/spack/stable
specs: specs:
- matrix:
- [$gcc_12.3.0]
- ['%gcc@12.3.0']
- matrix: - matrix:
- [$gcc_12.3.0_openmpi] - [$gcc_12.3.0_openmpi]
- [^openmpi%gcc] - [^openmpi%gcc]