From 115810a0e6d4bc70d1b972a641ac6b67819e3b40 Mon Sep 17 00:00:00 2001
From: Germann Elsa Sylvia <germann_e@merlin-l-001.psi.ch>
Date: Thu, 18 Aug 2022 09:35:53 +0200
Subject: [PATCH] ADD: new primitive libs and bins to packages.yaml

---
 env/merlin/sysconfigs/packages.yaml | 51 +++++++++++++++++++++++++++++
 1 file changed, 51 insertions(+)

diff --git a/env/merlin/sysconfigs/packages.yaml b/env/merlin/sysconfigs/packages.yaml
index 4614557..d93e121 100644
--- a/env/merlin/sysconfigs/packages.yaml
+++ b/env/merlin/sysconfigs/packages.yaml
@@ -136,6 +136,10 @@ packages:
     externals:
       - prefix: /opt/psi/Programming/intel/22.2
         spec: intel-oneapi-mpi@2021.6.0%intel@2021.6.0
+  json:
+    externals:
+      - prefix: /usr
+        spec: jsoncpp
   julia:
     externals:
       - prefix: /opt/psi/Programming/Julia/1.7.3
@@ -144,10 +148,41 @@ packages:
     externals:
       - prefix: /opt/psi/Tools/krb5/1.20
         spec: krb5@1.20
+  libbsd:
+    externals:
+      - prefix: /usr
+        spec: libbsd
+  libfabric:
+    buildable: false
+    externals:
+      - prefix: /usr
+        spec: libfabric@1.10.2
+  libffi:
+    buildable: false
+    externals:
+      - prefix: /usr
+        spec: libffi@6.0.1
   libfuse:
+    buildable: false
     externals:
       - prefix: /usr
         spec: libfuse@3.6.1
+  libogg:
+    externals:
+      - prefix: /usr
+        spec: libogg@0.8.0
+  libpng:
+    externals:
+      - prefix: /usr
+        spec: libpng@3.50.0
+  libpthread:
+    externals:
+      - prefix: /usr
+        spec: libpthread@2.17
+  libtiff:
+    externals:
+      - prefix: /usr
+        spec: libtiff@5.2.0
   libtool:
     externals:
       - prefix: /usr
@@ -160,6 +195,10 @@ packages:
     externals:
       - prefix: /opt/psi/Programming/lua/5.1.4.5
         spec: lua@5.1.4.5
+  lz4:
+    externals:
+      - prefix: /usr
+        spec: lz4@1.9.3
   m4:
     externals:
       - prefix: /usr
@@ -172,6 +211,10 @@ packages:
     externals:
       - prefix: /opt/psi/Programming/nasm/2.15.05
         spec: nasm@2.15.05
+  ncurses:
+    externals:
+      - prefix: /usr
+        spec: ncurses@5.9.20130511
   netcdf-c:
     externals:
       - prefix: /opt/psi/HDF5/netcdf/4.8.1/hdf5/1.13.1_slurm/openmpi/4.1.3_slurm/gcc/11.2.0
@@ -184,6 +227,10 @@ packages:
         spec: netcdf-fortran@4.8.1%gcc@11.2.0
       - prefix: /opt/psi/HDF5_serial/netcdf/4.6.1/hdf5_serial/1.10.3/gcc/7.3.0
         spec: netcdf-fortran@4.6.1%gcc@7.3.0
+  nlohmann-json:
+    externals:
+      - prefix: /usr
+        spec: nlohmann-json
   openjdk:
     externals:
       - prefix: /opt/psi/Programming/Java/15u36/bin
@@ -204,6 +251,10 @@ packages:
         spec: openssl@1.1.1n
       - prefix: /usr
         spec: openssl@1.0.2k-fips
+  pcre:
+    externals:
+      - prefix: /usr
+        spec: pcre@8.32
   perl:
     externals:
       - prefix: /opt/psi/Programming/perl/5.30.0