removing gh-pages branch and putting everything in master

js/customscripts.js

@@ -0,0 +1,48 @@
+$('.sub_menu').hide();
+$('.clickable').toggle(function (){
+    $(this).next('ul').slideToggle();
+    $(this).css('background-position', '0px -12px');
+}, function (){
+        $(this).next('ul').slideToggle();
+        $(this).css('background-position', '0px 5px');
+});
+
+$('ul.sub_menu').has('a.active').css('display', 'block');
+
+$('#myButton').tooltip();
+
+// this does the highlighting for the active tab of the sidebar
+
+$(function () {
+    setNavigation();
+});
+
+function setNavigation() {
+    var path = window.location.pathname;
+    path = path.replace(/\/$/, "");
+    path = decodeURIComponent(path);
+
+    $(".nav a").each(function () {
+        var href = $(this).attr('href');
+        if (path.substring(0, href.length) === href) {
+            $(this).closest('li').addClass('active');
+             $(this).closest('li').parents().addClass('active');
+
+        }
+
+    });
+
+}
+
+
+$('#mysidebar').height($(".nav").height());
+
+// only use the affix class if the viewport is greater than 500px. otherwise it gets cut off. 
+
+$( document ).ready(function() {
+    var h = $(window).height();
+    console.log (h);
+    if (h > 700) {
+   $( "#mysidebar" ).attr("class", "nav affix");
+   }
+});