vibed changes #1

docs/merlin6/how-to-use-merlin/archive.md

@@ -70,7 +70,7 @@ collected at a ***beamline***, you may have been assigned a **`p-group`**
 Groups are usually assigned to a PI, and then individual user accounts are added to the group. This must be done
 under user request through PSI Service Now. For existing **a-groups** and **p-groups**, you can follow the standard
 central procedures. Alternatively, if you do not know how to do that, follow the Merlin6
-**[Requesting extra Unix groups](/merlin6/request-account.html#requesting-extra-unix-groups)** procedure, or open
+**[Requesting extra Unix groups](../../quick-start-guide/requesting-accounts.md#requesting-extra-unix-groups)** procedure, or open
 a **[PSI Service Now](https://psi.service-now.com/psisp)** ticket.
 
 ### Documentation

docs/merlin6/how-to-use-merlin/connect-from-linux.md

@@ -14,7 +14,7 @@ ssh $username@merlin-l-002.psi.ch
 ## SSH with X11 Forwarding
 
 Official X11 Forwarding support is through NoMachine. Please follow the document
-[{Job Submission -> Interactive Jobs}](##/merlin6/interactive-jobs.html#Requirements) and
+[{Job Submission -> Interactive Jobs}](../slurm-general-docs/interactive-jobs.md#requirements) and
 [{Accessing Merlin -> NoMachine}](nomachine.md) for more details. However,
 we provide a small recipe for enabling X11 Forwarding in Linux.
 

docs/merlin6/how-to-use-merlin/connect-from-macos.md

@@ -10,7 +10,7 @@ permalink: /merlin6/connect-from-macos.html
 
 ## SSH without X11 Forwarding
 
-This is the standard method. Official X11 support is provided through [NoMachine](/merlin6/nomachine.html).
+This is the standard method. Official X11 support is provided through [NoMachine](nomachine.md).
 For normal SSH sessions, use your SSH client as follows:
 
 ```bash
@@ -30,8 +30,8 @@ you have it running before starting a SSH connection with X11 forwarding.
 ### SSH with X11 Forwarding in MacOS
 
 Official X11 support is through NoMachine. Please follow the document
-[{Job Submission -> Interactive Jobs}](/merlin6/interactive-jobs.html#Requirements) and
-[{Accessing Merlin -> NoMachine}](/merlin6/nomachine.html) for more details. However,
+[{Job Submission -> Interactive Jobs}](../slurm-general-docs/interactive-jobs.md#requirements) and
+[{Accessing Merlin -> NoMachine}](nomachine.md) for more details. However,
 we provide a small recipe for enabling X11 Forwarding in MacOS.
 
 * Ensure that **[XQuartz](https://www.xquartz.org/)** is installed and running in your MacOS.

docs/merlin6/how-to-use-merlin/connect-from-windows.md

@@ -14,7 +14,7 @@ PuTTY is one of the most common tools for SSH.
 Check, if the following software packages are installed on the Windows workstation by 
 inspecting the *Start* menu (hint: use the *Search* box to save time):
 * PuTTY (should be already installed)
-* *[Optional]* Xming (needed for [SSH with X11 Forwarding](/merlin6/connect-from-windows.html#ssh-with-x11-forwarding))
+* *[Optional]* Xming (needed for [SSH with X11 Forwarding](#ssh-with-putty-with-x11-forwarding))
 
 If they are missing, you can install them using the Software Kiosk icon on the Desktop.
 
@@ -32,8 +32,8 @@ If they are missing, you can install them using the Software Kiosk icon on the D
 ## SSH with PuTTY with X11 Forwarding
 
 Official X11 Forwarding support is through NoMachine. Please follow the document
-[{Job Submission -> Interactive Jobs}](/merlin6/interactive-jobs.html#Requirements) and
-[{Accessing Merlin -> NoMachine}](/merlin6/nomachine.html) for more details. However,
+[{Job Submission -> Interactive Jobs}](../slurm-general-docs/interactive-jobs.md#requirements) and
+[{Accessing Merlin -> NoMachine}](nomachine.md) for more details. However,
 we provide a small recipe for enabling X11 Forwarding in Windows.
 
 Check, if the **Xming** is installed on the Windows workstation by inspecting the 

docs/merlin6/how-to-use-merlin/kerberos.md

@@ -101,7 +101,7 @@ aklog
 
 ## Slurm jobs accessing AFS
 
-Some jobs may require to access private areas in AFS. For that, having a valid [**keytab**](/merlin6/kerberos.html#generating-granting-tickets-with-keytab) file is required.
+Some jobs may require to access private areas in AFS. For that, having a valid [**keytab**](#generating-granting-tickets-with-keytab) file is required.
 Then, from inside the batch script one can obtain granting tickets for Kerberos and AFS, which can be used for accessing AFS private areas.
 
 The steps should be the following:

docs/merlin6/how-to-use-merlin/transfer-data.md

@@ -28,7 +28,7 @@ visibility.
 ## Direct transfer via Merlin6 login nodes
 
 The following methods transfer data directly via the [login
-nodes](/merlin6/interactive.html#login-nodes-hardware-description). They are suitable
+nodes](../../quick-start-guide/accessing-interactive-nodes.md#login-nodes-hardware-description). They are suitable
 for use from within the PSI network.
 
 ### Rsync
@@ -72,7 +72,7 @@ The purpose of the software is to send a large file to someone, have that file a
 
 From August 2024, Merlin is connected to the **[PSI Data Transfer](https://www.psi.ch/en/photon-science-data-services/data-transfer)** service,
 `datatransfer.psi.ch`. This is a central service managed by the **[Linux team](https://linux.psi.ch/index.html)**. However, any problems or questions related to it can be directly 
-[reported](/merlin6/contact.html) to the Merlin administrators, which will forward the request if necessary.
+[reported](../../99-support/contact.md) to the Merlin administrators, which will forward the request if necessary.
 
 The PSI Data Transfer servers supports the following protocols:
 * Data Transfer - SSH (scp / rsync)
@@ -167,4 +167,4 @@ provides a helpful wrapper over the Gnome storage utilities, and provides suppor
 - [others](https://access.redhat.com/documentation/en-us/red_hat_enterprise_linux/8/html/using_the_desktop_environment_in_rhel_8/managing-storage-volumes-in-gnome_using-the-desktop-environment-in-rhel-8#gvfs-back-ends_managing-storage-volumes-in-gnome)
 
 
-[More instruction on using `merlin_rmount`](/merlin6/merlin-rmount.html)
+[More instruction on using `merlin_rmount`](merlin-rmount.md)