From 224ed99ad072ee34a802cdb30483b236dcbfdb34 Mon Sep 17 00:00:00 2001
From: Germann Elsa Sylvia <germann_e@pmod7.psi.ch>
Date: Tue, 21 Feb 2023 09:41:46 +0100
Subject: [PATCH 1/2] ADD: possibility to whitelist some modules

---
 pmodules_tools/deps_status/check.py | 10 +++++++---
 whitelist.txt                       | 10 ++++++++++
 2 files changed, 17 insertions(+), 3 deletions(-)
 create mode 100644 whitelist.txt

diff --git a/pmodules_tools/deps_status/check.py b/pmodules_tools/deps_status/check.py
index 43c9bbe8..dd8037a6 100644
--- a/pmodules_tools/deps_status/check.py
+++ b/pmodules_tools/deps_status/check.py
@@ -20,9 +20,13 @@ def deps_status_check(module_cmd_process):
 
 def failure_handler(module, given_status):
     if len(module) != 0:
-        print('Module: "' + module + '" should be deployed as ' + given_status)
-        global failed_at_least_once
-        failed_at_least_once = True
+        with open("whitelist.txt") as file:
+            content = file.read()
+            name = module.split()[0].split("/")[0]
+            if name not in content:
+                print('Module: "' + module + '" should be deployed as ' + given_status)
+                global failed_at_least_once
+                failed_at_least_once = True
 
 
 def subprocess_cmd(cmd):
diff --git a/whitelist.txt b/whitelist.txt
new file mode 100644
index 00000000..fff99b85
--- /dev/null
+++ b/whitelist.txt
@@ -0,0 +1,10 @@
+OPAL
+asciidoc
+cp2k
+cpmd
+dynamo
+fluka4
+gnuplot
+gromacs
+ior
+ncview
\ No newline at end of file

From 1114ebbba11cb24a6b0e505666dbef11c3c9e4c0 Mon Sep 17 00:00:00 2001
From: Germann Elsa Sylvia <germann_e@pmod7.psi.ch>
Date: Tue, 21 Feb 2023 13:40:29 +0100
Subject: [PATCH 2/2] FIX: check ws line problem solved

---
 pmodules_tools/db_diff/check.py | 23 ++++++++++++-----------
 1 file changed, 12 insertions(+), 11 deletions(-)

diff --git a/pmodules_tools/db_diff/check.py b/pmodules_tools/db_diff/check.py
index 6f39b3b0..72ae6319 100644
--- a/pmodules_tools/db_diff/check.py
+++ b/pmodules_tools/db_diff/check.py
@@ -31,19 +31,20 @@ def asciidoc_json_dump(list, name, steps, Pmodules_db_path):
     if len(list) > 1:
         list_range = len(list) - steps + 1
         for index in range(0, list_range, steps):
-            matrix_row = [list[index].split()[0]]
-            if steps == 2:
+            if len(list[index]) > 1:
+                matrix_row = [list[index].split()[0]]
+                if steps == 2:
+                    matrix_row += [
+                        list[index + 1].split()[1] + "->" + list[index].split()[1]
+                    ]
+                else:
+                    matrix_row += [list[index].split()[1]]
                 matrix_row += [
-                    list[index + 1].split()[1] + "->" + list[index].split()[1]
+                    list[index].split()[2],
+                    " ".join(list[index].split()[3:]),
+                    str(date.today()),
                 ]
-            else:
-                matrix_row += [list[index].split()[1]]
-            matrix_row += [
-                list[index].split()[2],
-                " ".join(list[index].split()[3:]),
-                str(date.today()),
-            ]
-            matrix.append(matrix_row)
+                matrix.append(matrix_row)
 
     # Update database file
     matrix += matrix_db