559f2d8d9c
- fix some warning if compiled serial
285 lines
8.0 KiB
C
285 lines
8.0 KiB
C
#include <stdlib.h>
|
|
#include <string.h>
|
|
#include "testframe.h"
|
|
#include "params.h"
|
|
|
|
static void
|
|
test_read_field_attribs(
|
|
h5_file_t file,
|
|
const char *field_name,
|
|
int position)
|
|
{
|
|
h5_err_t status;
|
|
char name[ATTR_NAME_SIZE];
|
|
char str[ATTR_NAME_SIZE];
|
|
h5_int32_t i32;
|
|
h5_int64_t i64;
|
|
h5_float32_t f32;
|
|
h5_float64_t f64;
|
|
|
|
TEST("Reading field attributes");
|
|
|
|
i64 = H5BlockGetNumFieldAttribs(file, field_name);
|
|
VALUE(i64 % 5, 0, "file attribute count");
|
|
|
|
get_attr_name(name, "str", position);
|
|
status = H5BlockReadFieldAttribString(
|
|
file, field_name, name, str);
|
|
RETURN(status, H5_SUCCESS, "H5BlockReadFieldAttribString");
|
|
SVALUE(str, ATTR_STR_VAL, "string attribute");
|
|
|
|
get_attr_name(name, "i32", position);
|
|
status = H5BlockReadFieldAttribInt32(
|
|
file, field_name, name, &i32);
|
|
RETURN(status, H5_SUCCESS, "H5BlockReadFieldAttribInt32");
|
|
IVALUE(i32, ATTR_INT32_VAL, "int32 attribute");
|
|
|
|
get_attr_name(name, "i64", position);
|
|
status = H5BlockReadFieldAttribInt64(
|
|
file, field_name, name, &i64);
|
|
RETURN(status, H5_SUCCESS, "H5BlockReadFieldAttribInt64");
|
|
IVALUE(i64, ATTR_INT64_VAL, "int64 attribute");
|
|
|
|
get_attr_name(name, "f32", position);
|
|
status = H5BlockReadFieldAttribFloat32(
|
|
file, field_name, name, &f32);
|
|
RETURN(status, H5_SUCCESS, "H5BlockReadFieldAttribFloat32");
|
|
FVALUE(f32, ATTR_FLOAT_VAL, "float32 attribute");
|
|
|
|
get_attr_name(name, "f64", position);
|
|
status = H5BlockReadFieldAttribFloat64(
|
|
file, field_name, name, &f64);
|
|
RETURN(status, H5_SUCCESS, "H5BlockReadFieldAttribFloat64");
|
|
FVALUE(f64, ATTR_FLOAT_VAL, "float64 attribute");
|
|
}
|
|
|
|
static void
|
|
test_read_data64(h5_file_t file, int step)
|
|
{
|
|
extern h5_size_t grid[3];
|
|
extern h5_size_t layout[6];
|
|
|
|
int i,t;
|
|
h5_err_t status;
|
|
h5_int64_t val, type[2];
|
|
char name[4];
|
|
h5_size_t field_rank[2], field_dims[6], elem_rank[2];
|
|
|
|
double *e;
|
|
double *ex,*ey,*ez;
|
|
h5_int64_t *id;
|
|
|
|
const size_t nelems =
|
|
(layout[1] - layout[0] + 1) *
|
|
(layout[3] - layout[2] + 1) *
|
|
(layout[5] - layout[4] + 1);
|
|
|
|
e=(double*)malloc(nelems*sizeof(double));
|
|
ex=(double*)malloc(nelems*sizeof(double));
|
|
ey=(double*)malloc(nelems*sizeof(double));
|
|
ez=(double*)malloc(nelems*sizeof(double));
|
|
id=(h5_int64_t*)malloc(nelems*sizeof(h5_int64_t));
|
|
|
|
TEST("Verifying dataset info");
|
|
|
|
#if defined(PARALLEL_IO)
|
|
int rank, nprocs;
|
|
MPI_Comm_rank(MPI_COMM_WORLD, &rank);
|
|
MPI_Comm_size(MPI_COMM_WORLD, &nprocs);
|
|
#endif
|
|
|
|
status = H5SetStep(file, step);
|
|
RETURN(status, H5_SUCCESS, "H5SetStep");
|
|
|
|
val = H5BlockGetNumFields(file);
|
|
IVALUE(val, 3, "field count");
|
|
|
|
for (i=0; i<3; i++) {
|
|
status = H5BlockGetFieldInfo(
|
|
file, i, name, 4,
|
|
field_rank, field_dims, elem_rank, type);
|
|
RETURN(status, H5_SUCCESS, "H5BlockGetFieldInfo");
|
|
|
|
status = H5BlockGetFieldInfoByName(
|
|
file, name,
|
|
field_rank+1, field_dims+3, elem_rank+1, type+1);
|
|
RETURN(status, H5_SUCCESS, "H5BlockGetFieldInfoByName");
|
|
IVALUE(field_rank[0], field_rank[1], "field rank");
|
|
IVALUE(field_dims[0], field_dims[3], "field dims x");
|
|
IVALUE(field_dims[1], field_dims[4], "field dims y");
|
|
IVALUE(field_dims[2], field_dims[5], "field dims z");
|
|
IVALUE(elem_rank[0], elem_rank[1], "elem rank");
|
|
IVALUE(type[0], type[1], "field type");
|
|
|
|
IVALUE(field_rank[0], 3, "field rank");
|
|
IVALUE(field_dims[0], grid[0]*NBLOCKX, "field dims x");
|
|
IVALUE(field_dims[1], grid[1]*NBLOCKY, "field dims y");
|
|
IVALUE(field_dims[2], grid[2]*NBLOCKZ, "field dims z");
|
|
if (i==1) {
|
|
CVALUE(name[0], 'e', "field name");
|
|
IVALUE(elem_rank[0], 1, "elem rank");
|
|
IVALUE(type[0], H5_FLOAT64_T, "field type");
|
|
} else if (i==0) {
|
|
CVALUE(name[0], 'E', "field name");
|
|
IVALUE(elem_rank[0], 3, "elem rank");
|
|
IVALUE(type[1], H5_FLOAT64_T, "field type");
|
|
} else if (i==2) {
|
|
CVALUE(name[0], 'i', "field name");
|
|
IVALUE(elem_rank[0], 1, "elem rank");
|
|
IVALUE(type[1], H5_INT64_T, "field type");
|
|
}
|
|
}
|
|
|
|
TEST("Reading 64-bit data");
|
|
|
|
for (t=step; t<step+NTIMESTEPS; t++)
|
|
{
|
|
val = H5HasStep(file, t);
|
|
IVALUE(val, 1, "has step");
|
|
|
|
status = H5SetStep(file, t);
|
|
RETURN(status, H5_SUCCESS, "H5SetStep");
|
|
|
|
test_read_field_attribs(file, "e", t);
|
|
|
|
status = H5Block3dSetView(file,
|
|
layout[0], layout[1],
|
|
layout[2], layout[3],
|
|
layout[4], layout[5]);
|
|
RETURN(status, H5_SUCCESS, "H5Block3dSetView");
|
|
|
|
status = H5Block3dReadScalarFieldFloat64(file, "e", e);
|
|
RETURN(status, H5_SUCCESS, "H5Block3dReadScalarFieldFloat64");
|
|
|
|
status = H5Block3dReadVector3dFieldFloat64(file,
|
|
"E", ex, ey, ez);
|
|
RETURN(status, H5_SUCCESS,
|
|
"H5Block3dReadVector3dFieldFloat64");
|
|
|
|
status = H5Block3dReadScalarFieldInt64(file, "id", id);
|
|
RETURN(status, H5_SUCCESS, "H5Block3dReadScalarFieldInt64");
|
|
|
|
for (i=0; i<nelems; i++)
|
|
{
|
|
FVALUE(e[i], 0.0 + (double)(i+nelems*t), " e data");
|
|
FVALUE(ex[i], 0.1 + (double)(i+nelems*t), " ex data");
|
|
FVALUE(ey[i], 0.2 + (double)(i+nelems*t), " ey data");
|
|
FVALUE(ez[i], 0.3 + (double)(i+nelems*t), " ez data");
|
|
IVALUE(id[i], (i+nelems*t), " id data");
|
|
}
|
|
}
|
|
}
|
|
|
|
static void
|
|
test_read_data32(h5_file_t file, int step)
|
|
{
|
|
extern h5_size_t grid[3];
|
|
|
|
int t;
|
|
h5_err_t status;
|
|
|
|
float *e;
|
|
float *ex,*ey,*ez;
|
|
int *id;
|
|
|
|
const size_t nelems = NBLOCKX * NBLOCKY * NBLOCKZ;
|
|
|
|
e=(float*)malloc(nelems*sizeof(double));
|
|
ex=(float*)malloc(nelems*sizeof(double));
|
|
ey=(float*)malloc(nelems*sizeof(double));
|
|
ez=(float*)malloc(nelems*sizeof(double));
|
|
id=(int*)malloc(nelems*sizeof(int));
|
|
|
|
TEST("Reading 32-bit data");
|
|
|
|
for (t=step; t<step+NTIMESTEPS; t++)
|
|
{
|
|
h5_int64_t val;
|
|
val = H5HasStep(file, t);
|
|
IVALUE(val, 1, "has step");
|
|
|
|
status = H5SetStep(file, t);
|
|
RETURN(status, H5_SUCCESS, "H5SetStep");
|
|
|
|
test_read_field_attribs(file, "e", t);
|
|
#if defined(PARALLEL_IO)
|
|
status = H5Block3dSetGrid(file, grid[0], grid[1], grid[2]);
|
|
RETURN(status, H5_SUCCESS, "H5Block3dSetGrid");
|
|
|
|
status = H5Block3dSetDims(file, NBLOCKX, NBLOCKY, NBLOCKZ);
|
|
RETURN(status, H5_SUCCESS, "H5Block3dSetDims");
|
|
#endif
|
|
status = H5Block3dReadScalarFieldFloat32(file, "e", e);
|
|
RETURN(status, H5_SUCCESS, "H5Block3dReadScalarFieldFloat32");
|
|
|
|
status = H5Block3dReadVector3dFieldFloat32(file,
|
|
"E", ex, ey, ez);
|
|
RETURN(status, H5_SUCCESS,
|
|
"H5Block3dReadVector3dFieldFloat32");
|
|
|
|
status = H5Block3dReadScalarFieldInt32(file, "id", id);
|
|
RETURN(status, H5_SUCCESS, "H5Block3dReadScalarFieldInt32");
|
|
|
|
int i;
|
|
for (i=0; i<nelems; i++)
|
|
{
|
|
FVALUE(e[i], 0.0f + (float)(i+nelems*t), " e data");
|
|
FVALUE(ex[i], 0.1f + (float)(i+nelems*t), " ex data");
|
|
FVALUE(ey[i], 0.2f + (float)(i+nelems*t), " ey data");
|
|
FVALUE(ez[i], 0.3f + (float)(i+nelems*t), " ez data");
|
|
IVALUE(id[i], (i+nelems*t), " id data");
|
|
}
|
|
}
|
|
}
|
|
|
|
void h5b_test_read1(void)
|
|
{
|
|
h5_file_t file1;
|
|
|
|
h5_err_t status;
|
|
MPI_Comm comm = MPI_COMM_WORLD;
|
|
|
|
TEST("Opening file once, read-only");
|
|
h5_prop_t props = H5CreateFileProp ();
|
|
status = H5SetPropFileMPIO (props, &comm);
|
|
RETURN(status, H5_SUCCESS, "H5SetPropFileMPIO");
|
|
status = H5SetPropFileThrottle (props, 2);
|
|
RETURN(status, H5_SUCCESS, "H5SetPropFileThrottle");
|
|
|
|
file1 = H5OpenFile(FILENAME, H5_O_RDONLY, props);
|
|
status = H5CheckFile(file1);
|
|
RETURN(status, H5_SUCCESS, "H5CheckFile");
|
|
|
|
status = H5CloseProp (props);
|
|
RETURN(status, H5_SUCCESS, "H5CloseProp");
|
|
|
|
test_read_data64(file1, 1);
|
|
|
|
status = H5CloseFile(file1);
|
|
RETURN(status, H5_SUCCESS, "H5CloseFile");
|
|
}
|
|
|
|
void h5b_test_read2(void)
|
|
{
|
|
h5_file_t file1;
|
|
h5_file_t file2;
|
|
|
|
h5_int64_t status;
|
|
|
|
TEST("Opening file twice, read-only");
|
|
file1 = H5OpenFile(FILENAME, H5_O_RDONLY, H5_PROP_DEFAULT);
|
|
status = H5CheckFile(file1);
|
|
RETURN(status, H5_SUCCESS, "H5CheckFile");
|
|
|
|
file2 = H5OpenFile(FILENAME, H5_O_RDONLY, H5_PROP_DEFAULT);
|
|
status = H5CheckFile(file2);
|
|
RETURN(status, H5_SUCCESS, "H5CheckFile");
|
|
|
|
test_read_data32(file1, NTIMESTEPS+1);
|
|
|
|
status = H5CloseFile(file1);
|
|
RETURN(status, H5_SUCCESS, "H5CloseFile");
|
|
status = H5CloseFile(file2);
|
|
RETURN(status, H5_SUCCESS, "H5CloseFile");
|
|
}
|