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  • ea79d93e63 update ignore prop gsell 2010-04-22 10:34:30 +00:00
  • 1607ada0b7 files removed gsell 2010-04-15 16:07:11 +00:00
  • f027b16757 gsell 2010-04-15 16:06:07 +00:00
  • 2bb4d67749 files added gsell 2010-04-15 16:05:34 +00:00
  • d2b696959c files removed gsell 2010-04-15 16:05:16 +00:00
  • 462fb26ba4 gsell 2010-04-15 16:00:41 +00:00
  • cf1368291d fixed the H5PART_HAVE_HDF5_18 logic to work with the 1.9 snapshot; fixed broken test in _H5Part_have_group in the codepath for HDF5 1.6 Marc Howison 2010-03-23 22:18:40 +00:00
  • 698b5e0c76 removed config.h.in Marc Howison 2010-03-11 23:04:27 +00:00
  • ea40b3272e fixes to lustre optimizations Marc Howison 2010-03-11 23:00:43 +00:00
  • 90f8506628 changed print functions to only print from proc 0 in parallel mode, except for 'debug detail' level which prints from all procs Marc Howison 2010-02-23 19:45:43 +00:00
  • a7727635a7 reverted the rename of xfer_prop because it is used in OPAL Marc Howison 2010-02-22 21:18:37 +00:00
  • 66476adf6a removed overloaded use of H5_USE_16_API so that it can be used with HDF 1.85 without invoking the HDF5 1.6 codepath in places Marc Howison 2010-02-22 18:35:37 +00:00
  • 1c4c62192d added chunking for H5Part; had to remove open object test because out-of-order file handle / property list closes were causing errors Marc Howison 2010-02-18 21:08:03 +00:00
  • fb660f8459 changed throttling routine; removed read-only restriction for setting step to existing steps; revised NEWS Marc Howison 2010-02-18 18:56:39 +00:00
  • 20bff7f87c fixes for HDF5 1.6.x Marc Howison 2010-02-17 03:19:20 +00:00
  • 64c2b96f27 incorporated fixes from Gunther for 1.6.0 release Marc Howison 2010-02-16 18:46:57 +00:00
  • 1d23bdab85 1.6 release: moved 1.5 to 1.6; copied 1.6 to tags/H5Part-1.6.0; copied 1.6 to 1.7 H5Part-1.6.0 Marc Howison 2010-02-16 17:06:40 +00:00
  • 0de2f00b08 fixed H5PartGetNumParticles to correctly count indexed views; added type parameter to H5BlockGetFieldInfo/ByName Marc Howison 2010-02-11 22:28:49 +00:00
  • 3300a665b5 updates to makefiles; added CrayXT configure crutch Marc Howison 2010-02-11 19:39:25 +00:00
  • f671d1ab9f fixed missing test/testf.F90 Marc Howison 2010-02-11 17:42:56 +00:00
  • ec7184bf2d fixed missing test/read.c Marc Howison 2010-02-11 17:42:18 +00:00
  • 46574c2482 fixed bug in strided selection; added examples dir with a strided write Fortran program (more examples to come...) Marc Howison 2010-02-11 17:34:50 +00:00
  • 2bb96c6f69 updated NEWS with details about 1.6 changes; changed hsize_t type in H5PartSetViewIndices; fixes to the build system; fixed bugs that were preventing the use of H5PartSetView during writes; added open object checks to regression test Marc Howison 2010-02-10 23:33:32 +00:00
  • 181c03008f major changes in preparations for 1.6 release: will add details to CHANGES Marc Howison 2010-02-10 01:02:14 +00:00
  • 4cb0c1bcfe gsell 2010-01-22 15:00:25 +00:00
  • 7c4126c2c8 integrated changes to iterators from Allen; refactored the HDF 1.6 vs. 1.8 API #ifs Marc Howison 2010-01-14 21:25:29 +00:00
  • 90c6032c34 fixed type id leaks found by Allen Marc Howison 2010-01-11 21:29:26 +00:00
  • f40afd9670 fixed H5Oget_info() bug from Allen Marc Howison 2010-01-11 20:37:05 +00:00
  • c8b49c520f fixed attribute read functions to use string type Marc Howison 2010-01-06 00:12:55 +00:00
  • a65e9586c5 fixed string attribute bug reported by Allen Sanderson Marc Howison 2010-01-05 23:26:23 +00:00
  • e833b1fd16 gsell 2009-12-08 00:03:44 +00:00
  • 6e9cfa47e1 mesh examples added gsell 2009-12-04 16:28:11 +00:00
  • ce9205c368 tetmesh_write2.c added gsell 2009-11-13 21:52:57 +00:00
  • 5584086e40 tag test added gsell 2009-11-13 21:51:38 +00:00
  • 65186f2186 tag implementation, bugfixes ... gsell 2009-11-13 21:50:38 +00:00
  • 5eb841ecdf tag implementation, bugfixes ... gsell 2009-11-13 21:48:01 +00:00
  • 57a9c11948 tag implementation, bugfixes ... gsell 2009-11-13 21:46:53 +00:00
  • 22a1fa33eb tag implementation, bugfixes ... gsell 2009-11-13 21:46:15 +00:00
  • 3c6065e2f9 flags are now stored in H5PartFile struct; added the 'throttle' as a runtime parameter instead of a compiler flag; merged H5Bench into the tests suite; compiles but need to perform regression tests Marc Howison 2009-10-16 22:37:20 +00:00
  • c3cd4d7c99 set collective mode as default for H5Part Marc Howison 2009-10-12 22:13:19 +00:00
  • fdd69338ea updated doxygen groups for H5(Multi)Block Marc Howison 2009-10-07 18:12:03 +00:00
  • 5d4d62f5c2 typo in Fortran linkage; fixed doxygen to use parallel flag Marc Howison 2009-10-06 17:58:39 +00:00
  • 195d58693a added throttling for reading Marc Howison 2009-09-10 04:45:48 +00:00
  • d149d8a5dd added write throttling for large concurency jobs with MPI-POSIX VFD Marc Howison 2009-09-10 02:49:59 +00:00
  • 8dac86872b added a proc shift option to H5MultiBlock, used in I/O benchmarking to defeat caching Marc Howison 2009-08-30 18:02:04 +00:00
  • 15ad7b21c5 added MPI_Comm_f2c in Fortran-C bindings Marc Howison 2009-08-25 17:40:49 +00:00
  • 1b8073b82b added API calls for int32 and float32 step attribs Marc Howison 2009-08-18 15:47:50 +00:00
  • c4961753a9 Adapted to new API gsell 2009-08-14 13:20:49 +00:00
  • 75fcb2f68f Adapted to new API gsell 2009-08-14 13:20:16 +00:00
  • ee0f09de43 Some type cast warning fixed gsell 2009-08-14 13:18:57 +00:00
  • 9f189e7146 gsell 2009-08-14 13:18:04 +00:00
  • 2ec6aad172 See H5Fed_inquiry.c gsell 2009-08-14 13:15:45 +00:00
  • 7e39956a36 - Query current level only - Documentation updated gsell 2009-08-14 13:15:08 +00:00
  • 1665bc9703 H5FedStoreBoundaryfaceGlobalID() removed gsell 2009-08-14 13:13:13 +00:00
  • 3eac0d6264 see H5Fed_retrieve.c gsell 2009-08-14 13:12:23 +00:00
  • 3e4028de84 some type cast warning fixed gsell 2009-08-14 13:10:18 +00:00
  • 0cb95e9683 - Function for traversing elements now returns local ID and local vertex IDs only - Function for traversing vertices returns local ID and coordinates only - Doxygen documentation updated gsell 2009-08-14 13:08:52 +00:00
  • 4f78beabde added gsell 2009-08-14 13:04:39 +00:00
  • 0228c69cfa - refactored variable names local_ prefix removed in some files - test existence of vertices while refining via adjecencies gsell 2009-08-14 13:03:48 +00:00
  • e047595885 set error handler to abort programm and removed all error checks gsell 2009-07-27 15:17:51 +00:00
  • 12722cebaf set error handler to abort programm and removed all error checks gsell 2009-07-27 15:17:22 +00:00
  • 0b9dcea258 set error handler to abort programm and removed all error checks gsell 2009-07-27 15:16:30 +00:00
  • 05061e09ae fixed empty line follows backslash warning gsell 2009-07-27 15:15:08 +00:00
  • da80c1736d binary tree replaced with hash-tables and several fixes gsell 2009-07-27 15:12:34 +00:00
  • 92a24b8890 bugfixes in start traverse functions gsell 2009-07-16 08:42:53 +00:00
  • 5b45cbce7a bugfixes in pointer calculation gsell 2009-07-16 08:41:44 +00:00
  • a65496cea3 include for hash search functions added gsell 2009-07-16 08:40:30 +00:00
  • 92adaf3509 _h5_calloc added gsell 2009-07-16 08:39:35 +00:00
  • f70dce9acc hash funktions added gsell 2009-07-16 08:38:09 +00:00
  • a4036b7b5d formating fix gsell 2009-07-16 08:36:49 +00:00
  • e38e7d1c8e error handler added gsell 2009-07-16 08:35:32 +00:00
  • d0daec98fa renamed gsell 2009-07-11 08:07:44 +00:00
  • 38a9e2ee90 renamed gsell 2009-07-11 08:06:50 +00:00
  • 3978da3963 renamed gsell 2009-07-11 08:05:59 +00:00
  • f4ea22a702 write TWiki-friendly output gsell 2009-07-11 08:05:24 +00:00
  • f1239351eb some tests added gsell 2009-07-11 08:03:31 +00:00
  • 5485eb2661 write TWiki-friendly output gsell 2009-07-11 08:02:27 +00:00
  • 06aef8a08f fixed bug in halo exchange when there is only one proc in the direction of the exchange Marc Howison 2009-07-10 21:34:44 +00:00
  • 57ce44db8b fixed format flag for H5MultiBlock timing output Marc Howison 2009-07-09 01:36:26 +00:00
  • 1104b9ff93 added timing output for H5MultiBlock reads Marc Howison 2009-07-08 20:14:56 +00:00
  • 01aa167339 changes to _H5Block_init so that only 1 dataset creation plist is created and reused Marc Howison 2009-07-06 21:31:42 +00:00
  • cd0391db7e added a test for existing datasets to write calls Marc Howison 2009-07-06 21:07:30 +00:00
  • 207e49716c Implemented two halo exchange routines: one uses an MPI vector datatype and the other manually packs and unpacks the send and recv buffers. The MPI datatype method is not currently working due to a "double free" error in libc. The manual buffering method has been debuged and works. Marc Howison 2009-07-06 16:42:03 +00:00
  • 639d91ee4e renamed gsell 2009-07-03 12:40:38 +00:00
  • 97a14cc488 fixed Fortran compile error with gfortran (had to move f90 files to F90) Marc Howison 2009-07-02 18:46:06 +00:00
  • 13d7784c44 added file open flags for Fortran interface Marc Howison 2009-07-02 18:22:30 +00:00
  • 00b0e87f10 forgot to remove existing write attrib functions from H5BlockF.inc and H5BlockF.c after adding them to the code generator Marc Howison 2009-07-02 17:06:12 +00:00
  • 6d38bf442d * H5Block: added attribute writing functions to code generator: still need to add reading functions * H5MultiBlock: added halo exchange routine: still needs debugging Marc Howison 2009-07-02 16:46:07 +00:00
  • 8f98ff0165 print all up- and downward adjacencies gsell 2009-07-01 19:18:54 +00:00
  • b6f2894ddb - up- and downward adjacencies implemented gsell 2009-07-01 19:17:38 +00:00
  • 607894f565 - read everything while opening mesh - upward and downward adjacencies added gsell 2009-07-01 19:16:24 +00:00
  • 35bbbfb1a9 added gsell 2009-07-01 19:15:14 +00:00
  • 3d4da8653a fixed bug with layout debug info always printing the layout for proc 0 Marc Howison 2009-06-24 18:45:23 +00:00
  • 0e853656cd * fixed bug in h5bl_defin3dchunkdims call that was using variables addresses ins * added new MultiBlock module that is used for efficiently loading regular rectilinear grid blocks (using chunking) and handling ghost zones in a distributed-memory environment ** still need to add the "halo exchange" routine for reshuffling ghost regions ** performed some basic testing of read/write functionality Marc Howison 2009-06-24 18:11:39 +00:00
  • 3d1ed0e92a found incorrect == comparison with read flag; replaced with & Marc Howison 2009-06-19 22:34:22 +00:00
  • b5e3756f57 fixed bug in H5Gopen2 where I was using the wrong group id Marc Howison 2009-06-19 18:34:57 +00:00
  • 122e913f08 Merged changes from LBL, including: * read/write call variants for different datatypes * HDF5 properties tuned for lustre filesystems and the Cray XT (enabled using flags passed during file open) * HDF5 chunking for field data * HDF5 alignment (set during file open) * support for both HDF5 1.6 and 1.8 using #if statements * a new error reporting level: debug_detail (HDF5 errors are now printed at debug level 1 by default) Marc Howison 2009-06-18 20:29:02 +00:00
  • 91b0543866 edge traversing added gsell 2009-06-12 23:56:07 +00:00
  • b3187bed21 edge traversing added gsell 2009-06-12 23:55:29 +00:00
  • 584ff25f33 some API function has been renamed gsell 2009-06-11 23:14:27 +00:00