continued merging H5Block: still some functionality missing (attribs, read, write); added H5Part regression tests; simplified several Makefile.am files and configure.ac; began merging new Fortran interface
This commit is contained in:
Marc Howison
+5
-2
@@ -16,8 +16,6 @@
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#ifndef __H5_H
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#define __H5_H
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#include "H5_inquiry.h"
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h5_file_t *
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H5OpenFile (
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const char * filename,
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@@ -30,6 +28,11 @@ H5CloseFile (
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h5_file_t * f
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);
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h5_err_t
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H5CheckFile (
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h5_file_t * f
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);
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h5_err_t
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H5SetStepNameFormat (
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h5_file_t *f,
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+110
-133
@@ -1,172 +1,149 @@
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/*
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Header file for declaring the H5Fed application programming
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interface (API) in the C language.
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Copyright 2006-2007
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Paul Scherrer Institut, Villigen, Switzerland;
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Benedikt Oswald;
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Achim Gsell
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All rights reserved.
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Authors
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Achim Gsell
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Warning
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This code is under development.
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*/
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#ifndef __H5Part_H
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#define __H5Part_H
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#ifndef __H5PART_H
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#define __H5PART_H
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#include <hdf5.h>
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h5_err_t
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H5PartSetNumParticles (
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h5_file_t *f, /*!< [in] Handle to open file */
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h5_int64_t nparticles /*!< [in] Number of particles */
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);
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#ifdef __cplusplus
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extern "C" {
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#endif
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h5_err_t
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H5PartSetNumParticlesStrided (
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h5_file_t *f, /*!< [in] Handle to open file */
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h5_int64_t nparticles, /*!< [in] Number of particles */
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h5_int64_t stride /*!< [in] Stride value (e.g. number of fields in the particle array) */
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);
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#include "h5core/h5_core.h"
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#include "H5.h"
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#ifdef PARALLEL_IO
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#include <mpi.h>
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#endif
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// #define H5PART_SUCCESS H5_SUCCESS
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#define H5PART_ERR_NOMEM H5_ERR_NOMEM
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#define H5PART_ERR_INVAL H5_ERR_INVAL
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#define H5PART_ERR_BADFD H5_ERR_BADFD
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#define H5PART_ERR_LAYOUT H5_ERR_LAYOUT
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#define H5PART_ERR_NOENT H5_ERR_NOENT
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#define H5PART_ERR_NOENTRY H5_ERR_NOENTRY
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#define H5PART_ERR_MPI H5_ERR_MPI
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#define H5PART_ERR_HDF5 H5_ERR_HDF5
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#define H5PART_READ H5_O_RDONLY
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#define H5PART_WRITE H5_O_WRONLY
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#define H5PART_APPEND H5_O_APPEND
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#define H5PART_INT64 ((h5_int64_t)H5T_NATIVE_INT64)
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#define H5PART_FLOAT64 ((h5_int64_t)H5T_NATIVE_DOUBLE)
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#define H5PART_CHAR ((h5_int64_t)H5T_NATIVE_CHAR)
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/*============== File Writing Functions ==================== */
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h5_int64_t
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H5PartDefineStepName (
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h5_err_t
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H5PartSetChunkSize (
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h5_file_t *f,
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const char *name,
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const h5_int64_t width
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h5_int64_t size
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);
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h5_int64_t
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H5PartSetNumParticles (
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h5_file_t *f,
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const h5_int64_t nparticles
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);
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h5_int64_t
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h5_err_t
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H5PartWriteDataFloat64 (
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h5_file_t *f,
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const char *name,
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const h5_float64_t *array
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h5_file_t *f, /*!< [in] Handle to open file */
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const char *name, /*!< [in] Name to associate array with */
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const h5_float64_t *data /*!< [in] Array to commit to disk */
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);
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h5_int64_t
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h5_err_t
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H5PartWriteDataFloat32 (
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h5_file_t *f, /*!< [in] Handle to open file */
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const char *name, /*!< [in] Name to associate array with */
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const h5_float32_t *data /*!< [in] Array to commit to disk */
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);
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h5_err_t
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H5PartWriteDataInt64 (
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h5_file_t *f,
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const char *name,
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const h5_int64_t *array
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h5_file_t *f, /*!< [in] Handle to open file */
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const char *name, /*!< [in] Name to associate array with */
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const h5_int64_t *data /*!< [in] Array to commit to disk */
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);
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h5_err_t
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H5PartWriteDataInt32 (
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h5_file_t *f, /*!< [in] Handle to open file */
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const char *name, /*!< [in] Name to associate array with */
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const h5_int32_t *data /*!< [in] Array to commit to disk */
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);
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h5_err_t
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H5PartReadDataFloat64 (
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h5_file_t *f, /*!< [in] Handle to open file */
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const char *name, /*!< [in] Name to associate dataset with */
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h5_float64_t *data /*!< [out] Array of data */
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);
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h5_err_t
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H5PartReadDataFloat32 (
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h5_file_t *f, /*!< [in] Handle to open file */
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const char *name, /*!< [in] Name to associate dataset with */
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h5_float32_t *data /*!< [out] Array of data */
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);
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h5_err_t
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H5PartReadDataInt64 (
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h5_file_t *f, /*!< [in] Handle to open file */
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const char *name, /*!< [in] Name to associate dataset with */
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h5_int64_t *data /*!< [out] Array of data */
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);
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h5_err_t
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H5PartReadDataInt32 (
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h5_file_t *f, /*!< [in] Handle to open file */
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const char *name, /*!< [in] Name to associate dataset with */
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h5_int32_t *data /*!< [out] Array of data */
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);
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/*================== File Reading Routines =================*/
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h5_int64_t
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H5PartGetNumDatasets (
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h5_file_t *f
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h5_file_t *f /*!< [in] Handle to open file */
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);
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h5_int64_t
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H5PartGetDatasetName (
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h5_file_t *f,
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const h5_int64_t idx,
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char *name,
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const h5_int64_t maxlen
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h5_file_t *f, /*!< [in] Handle to open file */
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const h5_int64_t idx, /*!< [in] Index of the dataset */
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char *name, /*!< [out] Name of dataset */
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const h5_int64_t len /*!< [in] Size of buffer \c name */
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);
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h5_int64_t
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H5PartGetDatasetInfo (
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h5_file_t *f,
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const h5_int64_t idx,
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char *name,
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const h5_int64_t maxlen,
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h5_int64_t *type,
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h5_int64_t *nelem);
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h5_file_t *f, /*!< [in] Handle to open file */
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const h5_int64_t idx,/*!< [in] Index of the dataset */
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char *dataset_name, /*!< [out] Name of dataset */
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const h5_int64_t len_dataset_name,
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/*!< [in] Size of buffer \c dataset_name */
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h5_int64_t *type, /*!< [out] Type of data in dataset */
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h5_int64_t *nelem /*!< [out] Number of elements. */
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);
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h5_int64_t
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H5PartGetNumParticles (
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h5_file_t *f
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h5_file_t *f /*!< [in] Handle to open file */
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);
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h5_int64_t
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H5PartSetView (
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h5_file_t *f,
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const h5_int64_t start,
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const h5_int64_t end
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);
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h5_int64_t
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H5PartGetView (
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h5_file_t *f,
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h5_int64_t *start,
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h5_int64_t *end
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h5_err_t
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H5PartResetView (
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h5_file_t *f /*!< [in] Handle to open file */
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);
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h5_int64_t
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H5PartHasView (
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h5_file_t *f
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h5_file_t *f /*!< [in] Handle to open file */
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);
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h5_int64_t
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H5PartResetView (
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h5_file_t *f
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h5_err_t
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H5PartSetView (
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h5_file_t *f, /*!< [in] Handle to open file */
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h5_int64_t start, /*!< [in] Start particle */
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h5_int64_t end /*!< [in] End particle */
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);
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h5_int64_t
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h5_err_t
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H5PartSetViewIndices (
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h5_file_t *f, /*!< [in] Handle to open file */
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const h5_int64_t *indices, /*!< [in] List of indices */
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h5_int64_t nelems /*!< [in] Size of list */
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);
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h5_err_t
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H5PartSetViewEmpty (
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h5_file_t *f /*!< [in] Handle to open file */
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);
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h5_err_t
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H5PartGetView (
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h5_file_t *f, /*!< [in] Handle to open file */
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h5_int64_t *start, /*!< [out] Start particle */
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h5_int64_t *end /*!< [out] End particle */
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);
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h5_err_t
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H5PartSetCanonicalView (
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h5_file_t *f
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h5_file_t *f /*!< [in] Handle to open file */
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);
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h5_int64_t
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H5PartReadDataFloat64(
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h5_file_t *f,
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const char *name,
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h5_float64_t *array
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);
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h5_int64_t
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H5PartReadDataInt64 (
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h5_file_t *f,
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const char *name,
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h5_int64_t *array
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);
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h5_int64_t
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H5PartReadParticleStep (
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h5_file_t *f,
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const h5_int64_t step,
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h5_float64_t *x, /* particle positions */
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h5_float64_t *y,
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h5_float64_t *z,
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h5_float64_t *px, /* particle momenta */
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h5_float64_t *py,
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h5_float64_t *pz,
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h5_int64_t *id /* and phase */
|
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);
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#ifdef __cplusplus
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}
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#endif
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|
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#endif
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+145
-6
@@ -1,3 +1,6 @@
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#ifndef __H5_ATTRIBS_H
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#define __H5_ATTRIBS_H
|
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|
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h5_err_t
|
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H5WriteFileAttribString (
|
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h5_file_t *const f, /*!< [in] Handle to open file */
|
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@@ -12,6 +15,140 @@ H5WriteStepAttribString (
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const char *value /*!< [in] Value of attribute */
|
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);
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|
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h5_err_t
|
||||
H5WriteFileAttribFloat32 (
|
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h5_file_t *const f, /*!< [in] Handle to open file */
|
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const char *name, /*!< [in] Name of attribute to create */
|
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const h5_float32_t *values, /*!< [in] Values of attribute */
|
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const h5_size_t nelems /*!< [in] Number of values */
|
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);
|
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|
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h5_err_t
|
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H5WriteStepAttribFloat32 (
|
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h5_file_t *const f, /*!< [in] Handle to open file */
|
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const char *name, /*!< [in] Name of attribute to create */
|
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const h5_float32_t *values, /*!< [in] Values of attribute */
|
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const h5_size_t nelems /*!< [in] Number of values */
|
||||
);
|
||||
|
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h5_err_t
|
||||
H5WriteFileAttribFloat64 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
const h5_float64_t *values, /*!< [in] Values of attribute */
|
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const h5_size_t nelems /*!< [in] Number of values */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5WriteStepAttribFloat64 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
const h5_float64_t *values, /*!< [in] Values of attribute */
|
||||
const h5_size_t nelems /*!< [in] Number of values */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5WriteFileAttribInt32 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
const h5_int32_t *values, /*!< [in] Values of attribute */
|
||||
const h5_size_t nelems /*!< [in] Number of values */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5WriteStepAttribInt32 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
const h5_int32_t *values, /*!< [in] Values of attribute */
|
||||
const h5_size_t nelems /*!< [in] Number of values */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5WriteFileAttribInt64 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
const h5_int64_t *values, /*!< [in] Values of attribute */
|
||||
const h5_size_t nelems /*!< [in] Number of values */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5WriteStepAttribInt64 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
const h5_int64_t *values, /*!< [in] Values of attribute */
|
||||
const h5_size_t nelems /*!< [in] Number of values */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadFileAttribString (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
char *buffer /*!< [out] Value of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadStepAttribString (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
char *buffer /*!< [out] Value of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadFileAttribInt32 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
h5_int32_t *buffer /*!< [out] Values of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadStepAttribInt32 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
h5_int32_t *buffer /*!< [out] Values of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadFileAttribInt64 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
h5_int64_t *buffer /*!< [out] Values of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadStepAttribInt64 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
h5_int64_t *buffer /*!< [out] Values of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadFileAttribFloat32 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
h5_float32_t *buffer /*!< [out] Values of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadStepAttribFloat32 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
h5_float32_t *buffer /*!< [out] Values of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadFileAttribFloat64 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
h5_float64_t *buffer /*!< [out] Values of attribute */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
H5ReadStepAttribFloat64 (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const char *name, /*!< [in] Name of attribute to create */
|
||||
h5_float64_t *buffer /*!< [out] Values of attribute */
|
||||
);
|
||||
|
||||
h5_int64_t
|
||||
H5GetNumFileAttribs (
|
||||
h5_file_t *const f /*!< [in] Handle to open file */
|
||||
@@ -25,24 +162,26 @@ H5GetNumStepAttribs (
|
||||
h5_int64_t
|
||||
H5GetFileAttribInfo (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const h5_int64_t attrib_idx, /*!< [in] Index of attribute to get
|
||||
const h5_size_t attrib_idx, /*!< [in] Index of attribute to get
|
||||
infos about */
|
||||
char *attrib_name, /*!< [out] Name of attribute */
|
||||
const h5_int64_t len_of_attrib_name,
|
||||
const h5_size_t len_of_attrib_name,
|
||||
/*!< [in] length of buffer \c name */
|
||||
h5_int64_t *attrib_type, /*!< [out] Type of value. */
|
||||
h5_int64_t *attrib_nelem /*!< [out] Number of elements */
|
||||
h5_size_t *attrib_nelem /*!< [out] Number of elements */
|
||||
);
|
||||
|
||||
h5_int64_t
|
||||
H5GetStepAttribInfo (
|
||||
h5_file_t *const f, /*!< [in] Handle to open file */
|
||||
const h5_int64_t attrib_idx, /*!< [in] Index of attribute to
|
||||
const h5_size_t attrib_idx, /*!< [in] Index of attribute to
|
||||
get infos about */
|
||||
char *attrib_name, /*!< [out] Name of attribute */
|
||||
const h5_int64_t len_of_attrib_name,
|
||||
const h5_size_t len_of_attrib_name,
|
||||
/*!< [in] length of buffer \c name */
|
||||
h5_int64_t *attrib_type, /*!< [out] Type of value. */
|
||||
h5_int64_t *attrib_nelem /*!< [out] Number of elements */
|
||||
h5_size_t *attrib_nelem /*!< [out] Number of elements */
|
||||
);
|
||||
|
||||
|
||||
#endif
|
||||
|
||||
@@ -16,4 +16,6 @@ H5HasStep (
|
||||
h5_file_t * const f,
|
||||
h5_id_t step
|
||||
);
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
@@ -1,10 +1,20 @@
|
||||
#ifndef __H5HUT_H
|
||||
#define __H5HUT_H
|
||||
|
||||
#ifdef __cplusplus
|
||||
extern "C" {
|
||||
#endif
|
||||
|
||||
#include "h5core/h5_core.h"
|
||||
#include "H5.h"
|
||||
#include "H5_inquiry.h"
|
||||
#include "H5_attribs.h"
|
||||
#include "H5Part.h"
|
||||
#include "H5Block.h"
|
||||
#include "H5Fed.h"
|
||||
|
||||
#ifdef __cplusplus
|
||||
}
|
||||
#endif
|
||||
|
||||
#endif
|
||||
|
||||
Executable
+8
@@ -0,0 +1,8 @@
|
||||
#!/bin/sh
|
||||
|
||||
echo "#ifndef __H5_H"
|
||||
echo "#define __H5_H"
|
||||
echo ""
|
||||
grep -P "(?s)^\w+\n[Hh]5\w+\s*\(.*?\)" $1 | sed 's/ {/;\n/'
|
||||
echo ""
|
||||
echo "#endif"
|
||||
@@ -3,40 +3,42 @@
|
||||
|
||||
#define H5_ATTRIB_FILE 0
|
||||
#define H5_ATTRIB_STEP 1
|
||||
#define H5_ATTRIB_FIELD 2
|
||||
|
||||
h5_int64_t
|
||||
h5_err_t
|
||||
h5_read_attrib (
|
||||
h5_file_t * const f,
|
||||
const char type,
|
||||
const char mode,
|
||||
const char *attrib_name,
|
||||
const hid_t attrib_type,
|
||||
void *attrib_value
|
||||
);
|
||||
|
||||
h5_int64_t
|
||||
h5_err_t
|
||||
h5_write_attrib (
|
||||
h5_file_t * const f,
|
||||
const char type,
|
||||
const char mode,
|
||||
const char *attrib_name,
|
||||
const hid_t attrib_type,
|
||||
const void *attrib_value,
|
||||
const hsize_t attrib_nelem
|
||||
);
|
||||
|
||||
h5_int64_t
|
||||
h5_err_t
|
||||
h5_get_attrib_info (
|
||||
h5_file_t *const f,
|
||||
const char type,
|
||||
const h5_int64_t attrib_idx,
|
||||
const char mode,
|
||||
const h5_size_t attrib_idx,
|
||||
char *attrib_name,
|
||||
const h5_int64_t len_attrib_name,
|
||||
const h5_size_t len_attrib_name,
|
||||
h5_int64_t *attrib_type,
|
||||
h5_int64_t *attrib_nelem
|
||||
h5_size_t *attrib_nelem
|
||||
);
|
||||
|
||||
h5_ssize_t
|
||||
h5_get_num_attribs (
|
||||
h5_file_t *const f,
|
||||
const char type
|
||||
const char mode
|
||||
);
|
||||
|
||||
#endif
|
||||
|
||||
@@ -10,9 +10,13 @@
|
||||
#include "h5_maps.h"
|
||||
#include "h5_openclose.h"
|
||||
#include "h5_readwrite.h"
|
||||
|
||||
#include "h5u_readwrite.h"
|
||||
#include "h5u_model.h"
|
||||
|
||||
#include "h5b_model.h"
|
||||
#include "h5b_attribs.h"
|
||||
|
||||
#include "h5t_core.h"
|
||||
|
||||
#endif
|
||||
|
||||
@@ -44,6 +44,11 @@ h5_get_num_procs (
|
||||
h5_file_t* const f
|
||||
);
|
||||
|
||||
hid_t
|
||||
h5_get_hdf5_file(
|
||||
h5_file_t* const f
|
||||
);
|
||||
|
||||
h5_size_t
|
||||
h5_get_num_steps (
|
||||
h5_file_t* const f
|
||||
|
||||
@@ -18,7 +18,7 @@ h5_set_step (
|
||||
const h5_int64_t step /*!< [in] Time-step to set. */
|
||||
);
|
||||
|
||||
hid_t
|
||||
h5_int64_t
|
||||
h5_normalize_h5_type (
|
||||
h5_file_t * const f,
|
||||
hid_t type
|
||||
@@ -39,6 +39,7 @@ h5_has_index (
|
||||
|
||||
h5_err_t
|
||||
h5_normalize_dataset_name (
|
||||
h5_file_t *const f,
|
||||
const char *name,
|
||||
char *name2
|
||||
);
|
||||
|
||||
@@ -25,8 +25,11 @@
|
||||
#define H5_FLOAT32_T H5T_NATIVE_FLOAT
|
||||
#define H5_INT64_T H5T_NATIVE_INT64
|
||||
#define H5_INT32_T H5T_NATIVE_INT32
|
||||
#define H5_STRING_T H5T_NATIVE_CHAR
|
||||
#define H5_COMPOUND_T H5T_COMPOUND
|
||||
|
||||
#define H5_VER_STRING "2.0.0"
|
||||
|
||||
extern const char * const H5_O_MODES[];
|
||||
|
||||
#ifdef WIN32
|
||||
|
||||
@@ -0,0 +1,31 @@
|
||||
#ifndef __H5B_ATTRIBS_H
|
||||
#define __H5B_ATTRIBS_H
|
||||
|
||||
h5_err_t
|
||||
h5_write_field_attrib (
|
||||
h5_file_t *const f, /*!< IN: file handle */
|
||||
const char *field_name, /*!< IN: field name */
|
||||
const char *attrib_name, /*!< IN: attribute name */
|
||||
const hid_t attrib_type, /*!< IN: attribute type */
|
||||
const void *attrib_value, /*!< IN: attribute value */
|
||||
const h5_int64_t attrib_nelem /*!< IN: number of elements */
|
||||
);
|
||||
|
||||
h5_ssize_t
|
||||
h5b_get_num_field_attribs (
|
||||
h5_file_t *const f, /*<! IN: file handle */
|
||||
const char *field_name /*<! IN: field name */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
h5b_get_field_attrib_info (
|
||||
h5_file_t *const f, /*!< IN: file handle */
|
||||
const char *field_name, /*!< IN: field name */
|
||||
const h5_size_t attrib_idx, /*!< IN: attribute index */
|
||||
char *attrib_name, /*!< OUT: attribute name */
|
||||
const h5_size_t len_attrib_name, /*!< IN: buffer size */
|
||||
h5_int64_t *attrib_type, /*!< OUT: attribute type */
|
||||
h5_size_t *attrib_nelem /*!< OUT: number of elements */
|
||||
);
|
||||
|
||||
#endif
|
||||
@@ -0,0 +1,90 @@
|
||||
#ifndef __H5B_MODEL_H
|
||||
#define __H5B_MODEL_H
|
||||
|
||||
h5_err_t
|
||||
h5b_3d_set_view (
|
||||
h5_file_t *const f, /*!< IN: File handle */
|
||||
const h5_size_t i_start, /*!< IN: start index of \c i */
|
||||
const h5_size_t i_end, /*!< IN: end index of \c i */
|
||||
const h5_size_t j_start, /*!< IN: start index of \c j */
|
||||
const h5_size_t j_end, /*!< IN: end index of \c j */
|
||||
const h5_size_t k_start, /*!< IN: start index of \c k */
|
||||
const h5_size_t k_end /*!< IN: end index of \c k */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
h5b_3d_set_chunk (
|
||||
h5_file_t *const f, /*!< IN: File handle */
|
||||
const h5_size_t i, /*!< IN: size of \c i */
|
||||
const h5_size_t j, /*!< IN: size of \c j */
|
||||
const h5_size_t k /*!< IN: size of \c k */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
h5b_3d_get_chunk (
|
||||
h5_file_t *const f, /*!< IN: File handle */
|
||||
const char *field_name, /*!< IN: name of dataset */
|
||||
h5_size_t *dims /*!< OUT: array containing the chunk dimensions */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
h5b_3d_get_view (
|
||||
h5_file_t *const f, /*!< IN: File handle */
|
||||
const int proc, /*!< IN: Processor to get partition from */
|
||||
h5_size_t *i_start, /*!< OUT: start index of \c i */
|
||||
h5_size_t *i_end, /*!< OUT: end index of \c i */
|
||||
h5_size_t *j_start, /*!< OUT: start index of \c j */
|
||||
h5_size_t *j_end, /*!< OUT: end index of \c j */
|
||||
h5_size_t *k_start, /*!< OUT: start index of \c k */
|
||||
h5_size_t *k_end /*!< OUT: end index of \c k */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
h5b_3d_get_reduced_view (
|
||||
h5_file_t *const f, /*!< IN: File handle */
|
||||
const int proc, /*!< IN: Processor to get partition from */
|
||||
h5_size_t *i_start, /*!< OUT: start index of \c i */
|
||||
h5_size_t *i_end, /*!< OUT: end index of \c i */
|
||||
h5_size_t *j_start, /*!< OUT: start index of \c j */
|
||||
h5_size_t *j_end, /*!< OUT: end index of \c j */
|
||||
h5_size_t *k_start, /*!< OUT: start index of \c k */
|
||||
h5_size_t *k_end /*!< OUT: end index of \c k */
|
||||
);
|
||||
|
||||
int
|
||||
h5b_3d_get_proc (
|
||||
h5_file_t *const f, /*!< IN: File handle */
|
||||
const h5_int64_t i, /*!< IN: \c i coordinate */
|
||||
const h5_int64_t j, /*!< IN: \c j coordinate */
|
||||
const h5_int64_t k /*!< IN: \c k coordinate */
|
||||
);
|
||||
|
||||
h5_ssize_t
|
||||
h5b_get_num_fields (
|
||||
h5_file_t *const f /*!< IN: File handle */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
h5b_get_field_info_by_name (
|
||||
h5_file_t *const f, /*!< IN: file handle */
|
||||
const char *name, /*!< OUT: field name */
|
||||
h5_size_t *grid_rank, /*!< OUT: grid rank */
|
||||
h5_size_t *grid_dims, /*!< OUT: grid dimensions */
|
||||
h5_size_t *field_rank, /*!< OUT: field rank */
|
||||
h5_int64_t *type /*!< OUT: datatype */
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
h5b_get_field_info (
|
||||
h5_file_t *const f, /*!< IN: file handle */
|
||||
const h5_size_t idx, /*!< IN: index of field */
|
||||
char *name, /*!< OUT: field name */
|
||||
const h5_size_t len_name, /*!< IN: buffer size */
|
||||
h5_size_t *grid_rank, /*!< OUT: grid rank */
|
||||
h5_size_t *grid_dims, /*!< OUT: grid dimensions */
|
||||
h5_size_t *field_rank, /*!< OUT: field rank */
|
||||
h5_int64_t *type /*!< OUT: datatype */
|
||||
);
|
||||
|
||||
#endif
|
||||
|
||||
@@ -70,5 +70,12 @@ h5u_set_chunk (
|
||||
const h5_size_t size
|
||||
);
|
||||
|
||||
h5_err_t
|
||||
h5u_get_chunk (
|
||||
h5_file_t *const f,
|
||||
const char *name,
|
||||
h5_size_t *size
|
||||
);
|
||||
|
||||
#endif
|
||||
|
||||
|
||||
Reference in New Issue
Block a user