From 33bba729f421dddf2b8b6bac903fba08e12fc301 Mon Sep 17 00:00:00 2001
From: Artur Glavic <artur.glavic@psi.ch>
Date: Mon, 5 Nov 2018 09:04:30 +0100
Subject: [PATCH] Add script for interactive continue run

---
 icsubmit | 47 +++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 47 insertions(+)
 create mode 100755 icsubmit

diff --git a/icsubmit b/icsubmit
new file mode 100755
index 0000000..445f96c
--- /dev/null
+++ b/icsubmit
@@ -0,0 +1,47 @@
+#!/bin/bash
+# script to submit interactive job to mcc05 or mcc06 with 64 cores
+[[ -z "$1" ]] && { echo "You have to supply mcc05 or mcc06" ; exit 1; }
+# make sure the tag for the generated files is correct 
+# by checking that all changes have been commited to GIT
+# (this does not include newly created files)
+if ( ! git diff-index --quiet --cached HEAD -- ) || ( ! git diff-files --quiet )
+  then
+    echo "Uncommitted changes in the GIT repository:"
+    git status --untracked-files=no
+
+    read -p "Add changes and commit, amend last commit or exit [c/a/e]: " res
+    case $res in
+        [Cc]* ) git commit -a;;
+        [Aa]* ) git commit -a --amend;;
+        * ) exit 1;;
+    esac
+fi
+
+CURRENT_VERSION=`git describe --tags --long`
+NCORES=${2:-64}
+# version to continue, by default this or the previous version
+CONTINUE_VERSION=${3:-$CURRENT_VERSION}
+if [ ! -f "runs/e2-estia_$CONTINUE_VERSION.run" ]; then
+    # get describe from previous version
+    echo "No run for revision $CONTINUE_VERSION, try to use previous version"
+    PREV_ID=`git log -n 2 --oneline --pretty=format:"%h" | tail -1`
+    CONTINUE_VERSION=`git describe --tags --long $PREV_ID`
+fi
+
+echo "Starting at `date`"
+echo "Running on hosts: $1"
+echo "Running on $NCORES processors."
+echo "Current working directory is `pwd`"
+echo "Estia GIT revision is $CURRENT_VERSION"
+echo "Continue run of revision $CONTINUE_VERSION"
+
+mpirun -np $NCORES --host $1 mcnp6.mpi c \
+      inp=crun.i outp=results/e2-estia_$CURRENT_VERSION.out \
+      runtpe=runs/e2-estia_$CONTINUE_VERSION.run \
+      mctal=results/e2-estia_$CURRENT_VERSION.mct \
+      mdata=results/e2-estia_$CURRENT_VERSION.mdt \
+      wwout=weight_windows/e2-estia_$CURRENT_VERSION.wwg \
+      wwone=weight_windows/e2-estia_$CURRENT_VERSION.wwo \
+      wwinp=weight_windows/current.wwg
+
+echo "Program finished with exit code $? at: `date`"