From 6405b6c83c8caf00f0005380ad052032006ead1d Mon Sep 17 00:00:00 2001 From: skoupy_r Date: Wed, 29 Nov 2023 18:08:11 +0100 Subject: [PATCH] Update ptychoScopy --- ptychoScopy.md | 12 ++++-------- 1 file changed, 4 insertions(+), 8 deletions(-) diff --git a/ptychoScopy.md b/ptychoScopy.md index 21b08fc..ce2a969 100644 --- a/ptychoScopy.md +++ b/ptychoScopy.md @@ -1,5 +1,9 @@ Jupyter based interactive data acquisition tool designed for appropriate ptychographic data collection. It computes nessesary characteristics which play crutial role in final data reconstruction. You can chose of **Direct methods** (mainly Single Side Band ptychography) or **Iterative reconstruction** which takes probe defocus into account. With this tool, you can check for probe CTF, scanning step size, probe overlap, detector camera length a proper angular range collection, reconstructed probe size and many more. +- [Step by step instructions](Instructions) +- [Microscope control panel](Controls) +- [About](About) + ### Calibrations Each STEM has its own combination of parameters (magnifications, probe currents, aperture angles, camera lengths or detectors). These have to be taken into account for proper data acquisition design. Before first use, fill your own values into the file **calibrations.xlsx**. Instructions how to fill are in the sheet called HELP. @@ -11,11 +15,3 @@ To open interactive panel, run the line: ### Main panel ![ptychoscopy_main](uploads/e1b6ff985dac9d92a4aa198df448ff33/ptychoscopy_main.PNG) - - - - - -- [Instructions sdfsdf](Instructions) -- [Controls](Controls) -- [About](About) \ No newline at end of file