diff --git a/.ipynb_checkpoints/ptychoScopy-checkpoint.ipynb b/.ipynb_checkpoints/ptychoScopy-checkpoint.ipynb
index e318b6e..c291c34 100644
--- a/.ipynb_checkpoints/ptychoScopy-checkpoint.ipynb
+++ b/.ipynb_checkpoints/ptychoScopy-checkpoint.ipynb
@@ -349,7 +349,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 179,
+   "execution_count": 200,
    "id": "8055b802-cf83-4250-aea9-54e3e6b73db0",
    "metadata": {},
    "outputs": [],
@@ -469,7 +469,7 @@
     "            fig.add_trace(go.Scatter(showlegend=False, x=d, y=pctf,   marker_color='gray', name='SSB-CTF',))\n",
     "            \n",
     "        fig.add_trace(go.Scatter(x=2*wavelength/(np.sin(semi_angle_corr*omega/1000))/100, y=pctf, marker_color='red', name=str(np.round(semi_angle_corr,2))+ ' mrad',))\n",
-    "        fig.update_xaxes(title_text=\"Real space distance (Å)\", range=[0, 2.5], type=\"log\", zeroline=False)\n",
+    "        fig.update_xaxes(title_text=\"Real space distance (Å)\", range=[0.0001, 2.5], type=\"log\", zeroline=False)\n",
     "        \n",
     "    fig.update_layout(legend=dict(orientation=\"h\",yanchor=\"bottom\",y=0.75,xanchor=\"right\",x=1))\n",
     "    # fig3.update_layout(title={'text': \"CTF\",'y':0.93, 'x':0.12,'xanchor': 'left','yanchor': 'top'})\n",
@@ -606,8 +606,8 @@
     "    \n",
     "    focusdepth = widgets.Label(value = f'Depth of focus  (nm) '+ str(np.round(wavelength/(semi_angle_corr/1000)**2/1000,1)), **align3) \n",
     "    \n",
-    "    checks = widgets.VBox([widgets.Label('Final checks'),check1,check2, check3,electron_dose,focusdepth, acquisition_time])  \n",
-    "    checks.layout = widgets.Layout(border='dashed 1px gray',margin='30px 5px 5px 5px', padding='10px 10px 10px 10px')\n",
+    "    \n",
+    "\n",
     "\n",
     "\n",
     "    ### METHODS ##########################################    \n",
@@ -628,13 +628,26 @@
     "        fig4.update_layout(xaxis = dict(tickmode = 'array', tickvals = opt.cameralengths()))\n",
     "        fig4.update_layout(width=800, height=225, margin =dict(l=110, r=30, t=30, b=30))\n",
     "    \n",
+    "    \n",
+    "        checks = widgets.VBox([widgets.Label('Final checks'), electron_dose,focusdepth, acquisition_time])  \n",
+    "        checks.layout = widgets.Layout(border='dashed 1px gray',margin='30px 5px 5px 5px', padding='10px 10px 10px 10px')\n",
+    "    \n",
+    "    \n",
     "        ### SHOWING ###\n",
     "        right_column = widgets.VBox([go.FigureWidget(fig),go.FigureWidget(fig5),go.FigureWidget(fig4)])\n",
     "        left_column = widgets.VBox([go.FigureWidget(fig8), go.FigureWidget(fig6)])\n",
     "        display(widgets.HBox([left_column, right_column, checks]))\n",
     "    \n",
+    "    \n",
+    "    \n",
+    "    \n",
+    "    \n",
     "    if method == 'iterative':\n",
     "        \n",
+    "        checks = widgets.VBox([widgets.Label('Final checks'),check1, check2, check3,electron_dose,focusdepth, acquisition_time])  \n",
+    "        checks.layout = widgets.Layout(border='dashed 1px gray',margin='30px 5px 5px 5px', padding='10px 10px 10px 10px')\n",
+    "        \n",
+    "        \n",
     "        ### PROBE WINDOW ##########################################\n",
     "        if beam_diameter < probe_window/2:\n",
     "            color  = \"green\"\n",
@@ -729,14 +742,14 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 180,
+   "execution_count": 201,
    "id": "7937f054-fcd0-4e67-a20f-7696f5903a94",
    "metadata": {},
    "outputs": [
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "3ff56079396a4d12814896dd2a44263f",
+       "model_id": "a6b2620a5190425a830b6176ed85a285",
        "version_major": 2,
        "version_minor": 0
       },
diff --git a/calibrations.xlsx b/calibrations.xlsx
index c63e2e3..de4d876 100644
Binary files a/calibrations.xlsx and b/calibrations.xlsx differ
diff --git a/ptychoScopy.ipynb b/ptychoScopy.ipynb
index e318b6e..c291c34 100644
--- a/ptychoScopy.ipynb
+++ b/ptychoScopy.ipynb
@@ -349,7 +349,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 179,
+   "execution_count": 200,
    "id": "8055b802-cf83-4250-aea9-54e3e6b73db0",
    "metadata": {},
    "outputs": [],
@@ -469,7 +469,7 @@
     "            fig.add_trace(go.Scatter(showlegend=False, x=d, y=pctf,   marker_color='gray', name='SSB-CTF',))\n",
     "            \n",
     "        fig.add_trace(go.Scatter(x=2*wavelength/(np.sin(semi_angle_corr*omega/1000))/100, y=pctf, marker_color='red', name=str(np.round(semi_angle_corr,2))+ ' mrad',))\n",
-    "        fig.update_xaxes(title_text=\"Real space distance (Å)\", range=[0, 2.5], type=\"log\", zeroline=False)\n",
+    "        fig.update_xaxes(title_text=\"Real space distance (Å)\", range=[0.0001, 2.5], type=\"log\", zeroline=False)\n",
     "        \n",
     "    fig.update_layout(legend=dict(orientation=\"h\",yanchor=\"bottom\",y=0.75,xanchor=\"right\",x=1))\n",
     "    # fig3.update_layout(title={'text': \"CTF\",'y':0.93, 'x':0.12,'xanchor': 'left','yanchor': 'top'})\n",
@@ -606,8 +606,8 @@
     "    \n",
     "    focusdepth = widgets.Label(value = f'Depth of focus  (nm) '+ str(np.round(wavelength/(semi_angle_corr/1000)**2/1000,1)), **align3) \n",
     "    \n",
-    "    checks = widgets.VBox([widgets.Label('Final checks'),check1,check2, check3,electron_dose,focusdepth, acquisition_time])  \n",
-    "    checks.layout = widgets.Layout(border='dashed 1px gray',margin='30px 5px 5px 5px', padding='10px 10px 10px 10px')\n",
+    "    \n",
+    "\n",
     "\n",
     "\n",
     "    ### METHODS ##########################################    \n",
@@ -628,13 +628,26 @@
     "        fig4.update_layout(xaxis = dict(tickmode = 'array', tickvals = opt.cameralengths()))\n",
     "        fig4.update_layout(width=800, height=225, margin =dict(l=110, r=30, t=30, b=30))\n",
     "    \n",
+    "    \n",
+    "        checks = widgets.VBox([widgets.Label('Final checks'), electron_dose,focusdepth, acquisition_time])  \n",
+    "        checks.layout = widgets.Layout(border='dashed 1px gray',margin='30px 5px 5px 5px', padding='10px 10px 10px 10px')\n",
+    "    \n",
+    "    \n",
     "        ### SHOWING ###\n",
     "        right_column = widgets.VBox([go.FigureWidget(fig),go.FigureWidget(fig5),go.FigureWidget(fig4)])\n",
     "        left_column = widgets.VBox([go.FigureWidget(fig8), go.FigureWidget(fig6)])\n",
     "        display(widgets.HBox([left_column, right_column, checks]))\n",
     "    \n",
+    "    \n",
+    "    \n",
+    "    \n",
+    "    \n",
     "    if method == 'iterative':\n",
     "        \n",
+    "        checks = widgets.VBox([widgets.Label('Final checks'),check1, check2, check3,electron_dose,focusdepth, acquisition_time])  \n",
+    "        checks.layout = widgets.Layout(border='dashed 1px gray',margin='30px 5px 5px 5px', padding='10px 10px 10px 10px')\n",
+    "        \n",
+    "        \n",
     "        ### PROBE WINDOW ##########################################\n",
     "        if beam_diameter < probe_window/2:\n",
     "            color  = \"green\"\n",
@@ -729,14 +742,14 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 180,
+   "execution_count": 201,
    "id": "7937f054-fcd0-4e67-a20f-7696f5903a94",
    "metadata": {},
    "outputs": [
     {
      "data": {
       "application/vnd.jupyter.widget-view+json": {
-       "model_id": "3ff56079396a4d12814896dd2a44263f",
+       "model_id": "a6b2620a5190425a830b6176ed85a285",
        "version_major": 2,
        "version_minor": 0
       },