# The old Analysis-edge environment derived from the same set of packages but using 
# the most up-to-date packages from conda-forge. This env will be replaced by 'analysis' 
# Therefore this will follow upstream packages closer but also break from time to time.
name: analysis_edge
channels:
   - conda-forge
dependencies:
# essentials
   - python>=3.11
   - pip
   - numpy
   - scipy
   - pandas
   - numba
   - matplotlib
   - ipython
   - jupyterlab
   - ipympl
   - joblib
   - tqdm # sfdata dependency but here given explicitly
   - lmfit
   - pytest
# useful development packages
   - black
   - pytest
   - h5py # sfdata dependency but here given explicitly
   - pint
   - line_profiler
   - loguru
   - pylint
   - ipytest # used to be taken from pip, but here we test the conda-forge version
   - sqlalchemy # X-ray transmission calculations and similar
   - xraydb     # X-ray transmission calculations and similar
   - scikit-image # Image processing
# and extra control parts
   - fabric
# Jupyterlab extensions
   - nb_conda_kernels # for discovery of other kernels
#   - jupyterlab-drawio
   - jupyterlab_code_formatter
   # - jupytext # needs to be tested manually
# PSI specific modules
   - paulscherrerinstitute::sfdata
#   - paulscherrerinstitute::jungfrau_utils # should be a dependency of sfdata, but not listed there explicitly, so test
#   - pip:
#     - ipytest
## Dependencies
#   - bitshuffle # dependency of sfdata
#   - colorama   # dependency of sfdata
## Probably can be removed
# - astropy    # Used for conversion of magnet coordinates, probably not needed any more
# - loguru     # Not sure if it's needed in the analysis env
# - pyqt       # Not sure if it's needed in the analysis env
# still necessary manually afterwards:
# pip install jupyterlab_hdf
# jupyter labextension install @jupyterlab/hdf5