From a730368678c5b652a9e12e6c0cf3ab02494e1feb Mon Sep 17 00:00:00 2001 From: Florez Ospina Juan Felipe Date: Tue, 27 May 2025 10:03:03 +0200 Subject: [PATCH] Add step to adjust uncertainties --- notebooks/demo_acsm_pipeline.ipynb | 18 +++++++----------- 1 file changed, 7 insertions(+), 11 deletions(-) diff --git a/notebooks/demo_acsm_pipeline.ipynb b/notebooks/demo_acsm_pipeline.ipynb index bfbeef1..64c5468 100644 --- a/notebooks/demo_acsm_pipeline.ipynb +++ b/notebooks/demo_acsm_pipeline.ipynb @@ -234,7 +234,7 @@ "outputs": [], "source": [ "import warnings\n", - "\n", + "print(APPEND_DATA_DIR)\n", "DATA_DIR = f\"{APPEND_DATA_DIR}/ACSM_TOFWARE_processed/{YEAR}\"\n", "FLAGS_DIR = f\"{APPEND_DATA_DIR}/ACSM_TOFWARE_flags/{YEAR}\"\n", "\n", @@ -243,13 +243,7 @@ "PATH3 = f\"{DATA_DIR}/ACSM_{STATION_ABBR}_{YEAR}_timeseries_calibration_factors.csv\"\n", "PATH4 = f\"{FLAGS_DIR}/ACSM_{STATION_ABBR}_{YEAR}_timeseries_flags.csv\"\n", "\n", - "\n", - "\n", - "\n", - " # Your code that might generate warnings\n", - "\n", - "\n", - "\n", + "[print(p, os.path.exists(p)) for p in [PATH1,PATH2,PATH3,PATH4]]\n", "update_actris_header('../campaignDescriptor.yaml')\n", "\n", "month = \"2-3\"\n", @@ -273,7 +267,7 @@ "outputs": [], "source": [ "#path_to_data_file = '../data/CH0001G.20240201010000.20250519140310.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.2mo.1h.CH02L_Aerodyne_ToF-ACSM_017.CH02L_Aerodyne_ToF-ACSM_JFJ.lev2.nas'\n", - "path_to_data_file = '../data/CH0002G.20240201010000.20250526175557.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.7w.1h.CH02L_Aerodyne_ToF-ACSM_092.CH02L_Aerodyne_ToF-ACSM_PAY.lev2.nas'\n", + "path_to_data_file = '../data/CH0001G.20240201010000.20250527075812.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.2mo.1h.CH02L_Aerodyne_ToF-ACSM_017.CH02L_Aerodyne_ToF-ACSM_JFJ.lev2.nas'\n", "\n", "drop_column_from_nas_file(path_to_data_file, column_to_remove='inletP')" ] @@ -303,8 +297,10 @@ "metadata": {}, "outputs": [], "source": [ - "path_to_data_file = '../data/CH0002G.20240201010000.20250526175557.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.7w.1h.CH02L_Aerodyne_ToF-ACSM_092.CH02L_Aerodyne_ToF-ACSM_PAY.lev2.nas'\n", - "adjust_uncertainty_column_in_nas_file(path_to_data_file, base_column_name='Org')" + "path_to_data_file = '../data/CH0001G.20240201010000.20250527075812.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.2mo.1h.CH02L_Aerodyne_ToF-ACSM_017.CH02L_Aerodyne_ToF-ACSM_JFJ.lev2.nas'\n", + "#adjust_uncertainty_column_in_nas_file(path_to_data_file, base_column_name='Org')\n", + "variables = ['Org', 'NO3']\n", + "adjust_uncertainty_column_in_nas_file(path_to_data_file, base_column_names=variables)" ] }, {