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Updated gitignore to latest version and added env_setup.sh bash file

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florez_j
2024-11-18 07:48:29 +01:00
parent 6609175dc5
commit 88f97d7795
2 changed files with 32 additions and 1 deletions
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#!/bin/bash
# Define the name and location of the environment
ENV_NAME="multiphase_chem_env"
ENV_PATH="./envs/$ENV_NAME" # Define a custom output folder
# Check if mamba is available and use it instead of conda for faster installation
if command -v mamba &> /dev/null; then
CONDA_COMMAND="mamba"
else
CONDA_COMMAND="conda"
fi
# Create the conda environment with all dependencies
$CONDA_COMMAND create -y -p "$ENV_PATH" python=3.11 \
jupyter numpy pandas matplotlib plotly=5.24 scipy pip
# Activate the new environment
source activate "$ENV_PATH" || conda activate "$ENV_PATH"
# Install pip packages in one go to avoid repeated initializations
pip install h5py==3.10 pybis==1.35 igor2 ipykernel dash dash-bootstrap-components
# Export the environment to a YAML file
$CONDA_COMMAND env export --prefix "$ENV_PATH" > "$ENV_PATH/environment.yaml"
# Print success message
echo "Environment '$ENV_NAME' created successfully at '$ENV_PATH'."
echo "Environment configuration saved to '$ENV_PATH/environment.yaml'."