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Update Dockerfile and docker-compose.yaml. By default, container can use cifs to map network drives so no need to install, and added bash command to docker compose file to run both jupyterlab and dash board simultanously

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This commit is contained in:
florez_j
2025-04-02 14:09:44 +02:00
parent c6b010702c
commit 73648ebe31
2 changed files with 56 additions and 48 deletions
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6
Dockerfile
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@ -9,6 +9,8 @@ ENV ENV_NAME=apog_penv
# Set the working directory # Set the working directory
WORKDIR /acsmdc WORKDIR /acsmdc
#RUN apt-get update && apt-get install -y cifs-utils
# Use mamba if available for faster installation # Use mamba if available for faster installation
RUN conda install -y -n base -c conda-forge mamba && \ RUN conda install -y -n base -c conda-forge mamba && \
mamba create -y -n $ENV_NAME -c conda-forge -c defaults python=3.11 \ mamba create -y -n $ENV_NAME -c conda-forge -c defaults python=3.11 \
@ -24,6 +26,7 @@ ENV PATH=/opt/conda/envs/$ENV_NAME/bin:$PATH
# Create necessary directories for VOLUME # Create necessary directories for VOLUME
RUN mkdir -p /acsmdc/data /acsmdc/figures /acsmdc/pipelines/params RUN mkdir -p /acsmdc/data /acsmdc/figures /acsmdc/pipelines/params
#RUN mkdir -p /mnt/lac_ord
# Copy project files, excluding certain directories (handled via .dockerignore) # Copy project files, excluding certain directories (handled via .dockerignore)
COPY . /acsmdc COPY . /acsmdc
@ -43,4 +46,5 @@ RUN pip install --no-cache-dir jupyterlab
#RUN pip install --no-cache-dir matplotlib scikit-learn #RUN pip install --no-cache-dir matplotlib scikit-learn
# If you want to set JupyterLab as the default command # If you want to set JupyterLab as the default command
CMD ["jupyter", "lab", "--ip=0.0.0.0", "--port=8888", "--no-browser", "--allow-root", "--NotebookApp.token='my-token'"] #CMD ["jupyter", "lab", "--ip=0.0.0.0", "--port=8888", "--no-browser", "--allow-root", "--NotebookApp.token='my-token'"]
CMD ["/bin/bash"]

8
docker-compose.yaml
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@ -1,5 +1,5 @@
services: services:
data_processor: datachain_processor:
image: datachain_processor image: datachain_processor
container_name: datachain_processor container_name: datachain_processor
restart: unless-stopped restart: unless-stopped
@ -13,7 +13,11 @@ services:
- ./figures:/acsmdc/figures - ./figures:/acsmdc/figures
- ./pipelines/params:/acsmdc/pipelines/params - ./pipelines/params:/acsmdc/pipelines/params
- lac_ord:/mnt/network/lac_ord:rw - lac_ord:/mnt/network/lac_ord:rw
command: ["jupyter", "lab", "--ip=0.0.0.0", "--port=8888", "--no-browser", "--allow-root", "--NotebookApp.token='my-token'"] command: >
bash -c "
jupyter lab --ip=0.0.0.0 --port=8888 --no-browser --allow-root --NotebookApp.token='my-token' &
python /acsmdc/app/data_flagging_app.py
"
volumes: volumes:
lac_ord: lac_ord: