Commit Graph

272 Commits

Author SHA1 Message Date
e152c9eefd Update file TODO.md 2025-05-12 14:38:39 +02:00
0e642d4b9b Update file TODO.md 2025-05-08 11:19:59 +02:00
1c0a4631aa Update file TODO.md 2025-05-08 09:20:06 +02:00
ae107acea8 Update file TODO.md 2025-04-11 14:54:35 +02:00
5a54a22ebd Update after run with PAY dataset. 2025-04-11 11:31:35 +02:00
0353c8492b Added data chain step. This step updates the current parameters with new input folder params 2025-04-11 11:23:04 +02:00
4408514439 Rename attribute station --> station_abbr 2025-04-11 11:20:48 +02:00
e7863078aa Add data chain step /update_datachain_params.py. This uses params specified in input data folder to update current data chain params 2025-04-11 11:07:52 +02:00
cea83396d2 Add function to estimate project directory path 2025-04-11 11:05:41 +02:00
68a7d5dc2b Fix out of bound error in pipelines/steps/visualize_datatable_vars.py 2025-04-11 11:04:00 +02:00
c9e25c2483 Add new placeholder for submitter name and remove metadata element 'station' conflicting with third party converter 2025-04-11 11:02:38 +02:00
13bcd88a93 Replace station attribute with station_abbr, so it does not conflict with ebas database naming 2025-04-11 10:41:05 +02:00
6c8cb61df2 I added some todos 2025-04-10 16:51:46 +02:00
b0b3ccef66 Update campaignDescriptor.yaml with originator and submitter info 2025-04-08 21:27:51 +02:00
4725d85e61 Update data chain notebook 2025-04-08 21:26:36 +02:00
881209bf82 Update steps to allow filenames for PAYERN station 2025-04-08 21:26:01 +02:00
3dfed2c5f3 Update pipelines/steps/prepare_ebas_submission.py. Rmoved hard coded paths and build output name using metadata from campaign descriptor. Also, we can now specify month ranges 2025-04-08 18:44:46 +02:00
5dd280e88c Update pipelines/steps/utils.py. Now we can load the campaign descriptor using load_project_yaml_files() 2025-04-08 18:43:01 +02:00
bfaaeb4416 Add header templates for JFJ and PAY 2025-04-08 18:35:44 +02:00
ca0366338a Add pipeline step to update actris_header with submitter and originator 2025-04-08 18:34:51 +02:00
0e625b558a Update third party submodule 2025-04-08 15:46:18 +02:00
00a85505c8 Fix bug when infering name of flags file from dataset name 2025-04-04 16:53:41 +02:00
dcf6b8ec41 Clean up and document steps in notebooks/demo_visualize_diagnostic_flags_from_hdf5_file.ipynb 2025-04-04 16:07:07 +02:00
d290daaa39 Update pipelines/steps/visualize_datatable_vars.py. Specify alternative path to flags in case they are not in the HDF5 file. We assume there is an append directory where they may be. Otherwise it throws and error. 2025-04-04 16:06:11 +02:00
b3b5516aed Fix typo in README.md 2025-04-04 09:46:36 +02:00
17f497f1c5 Update README.md with instructions to set up network drive access credentials and update TODO.md 2025-04-02 14:40:55 +02:00
9a23bf283a Fix output directory in campaignDescripor.yaml 2025-04-02 14:17:45 +02:00
73c0409207 Update README.md with instruction to build, run, and stop docker container on which the data chain will run 2025-04-02 14:10:52 +02:00
73648ebe31 Update Dockerfile and docker-compose.yaml. By default, container can use cifs to map network drives so no need to install, and added bash command to docker compose file to run both jupyterlab and dash board simultanously 2025-04-02 14:09:44 +02:00
c6b010702c Remove run_container.sh. This is now done by running the docker-compose.yaml file using docker 2025-04-02 11:27:42 +02:00
643a305782 Update ACSM data chain workflow with markdown descriptions 2025-04-02 11:26:03 +02:00
f0da41e914 Add docker-compose.yaml to replace run_container.sh 2025-04-02 11:17:20 +02:00
1e7f92d6e8 Update ignore files 2025-04-02 11:15:36 +02:00
14cb24fb4b Add config files .sh .yaml and .md to dockerignore 2025-03-18 09:21:26 +01:00
aac6015986 Update README with Docker container workflow 2025-03-18 08:57:51 +01:00
b7cbf7dd14 Add bash script to run container 2025-03-18 08:57:06 +01:00
41506519d3 WIP: Update Dockerfile with requirements.txt that downgrade versions so that ebas converter can run. We need to rethink the Dockerfile container workflow using docker compose 2025-03-18 08:55:52 +01:00
862a2c46e6 Clean up notebooks 2025-03-18 08:53:51 +01:00
b0d68747e9 Update code to rearrange table columns based on column_order from acsm_to_ebas.yaml. This can be removed in the future. 2025-03-18 07:23:54 +01:00
261c8b8154 Add column order attributes, storing the order in which variables need to be displayed to adhere to Nora's initial implementation. 2025-03-18 07:22:06 +01:00
f3010bff47 Fix import problem. The app didn't run from a notebooks/<>.ipynb. This however may not be needed any longer. Is it good practice to run dashboards from a jupyter notebook? 2025-03-18 07:14:44 +01:00
395b734cd6 Fix bug reported in TODO.md. FLAGGING APP didnt record the parent channel correctly, that is the channel that originated a particular flag. An additional problem was detected and corrected where _metadata.json was confused as flag. 2025-03-17 14:21:26 +01:00
895a44cc8c Update notebooks/demo_acsm_pipeline.ipynb by introducing global append and input file variables. 2025-03-14 15:26:37 +01:00
d5a89b2fbd Add more items to TODO.md 2025-03-14 15:25:47 +01:00
f90708b043 Update todo.md 2025-03-14 15:17:31 +01:00
9504576fc0 Refactor steps using main functions from each step instead of subprocess with command line interface 2025-03-14 13:44:03 +01:00
b93cb7517b Add comment to indicate where params are defined in original code. 2025-03-14 13:40:22 +01:00
7d277e3e3b Clean up print statements. 2025-03-14 13:39:12 +01:00
39a9ab07a2 Refactor command line interface to run a main function on the parsed arguments. 2025-03-14 13:36:52 +01:00
8cdd8a0771 Completed command line interface for pipelines/steps/prepare_ebas_submission.py. This finishes WIP associated with commit 2eb88e4. 2025-03-14 13:09:09 +01:00