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Add step to adjust uncertainties

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florez_j
2025-05-27 10:03:03 +02:00
parent f3f830487e
commit a730368678
1 changed files with 7 additions and 11 deletions
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18
notebooks/demo_acsm_pipeline.ipynb
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@ -234,7 +234,7 @@
"outputs": [], "outputs": [],
"source": [ "source": [
"import warnings\n", "import warnings\n",
"\n", "print(APPEND_DATA_DIR)\n",
"DATA_DIR = f\"{APPEND_DATA_DIR}/ACSM_TOFWARE_processed/{YEAR}\"\n", "DATA_DIR = f\"{APPEND_DATA_DIR}/ACSM_TOFWARE_processed/{YEAR}\"\n",
"FLAGS_DIR = f\"{APPEND_DATA_DIR}/ACSM_TOFWARE_flags/{YEAR}\"\n", "FLAGS_DIR = f\"{APPEND_DATA_DIR}/ACSM_TOFWARE_flags/{YEAR}\"\n",
"\n", "\n",
@ -243,13 +243,7 @@
"PATH3 = f\"{DATA_DIR}/ACSM_{STATION_ABBR}_{YEAR}_timeseries_calibration_factors.csv\"\n", "PATH3 = f\"{DATA_DIR}/ACSM_{STATION_ABBR}_{YEAR}_timeseries_calibration_factors.csv\"\n",
"PATH4 = f\"{FLAGS_DIR}/ACSM_{STATION_ABBR}_{YEAR}_timeseries_flags.csv\"\n", "PATH4 = f\"{FLAGS_DIR}/ACSM_{STATION_ABBR}_{YEAR}_timeseries_flags.csv\"\n",
"\n", "\n",
"\n", "[print(p, os.path.exists(p)) for p in [PATH1,PATH2,PATH3,PATH4]]\n",
"\n",
"\n",
" # Your code that might generate warnings\n",
"\n",
"\n",
"\n",
"update_actris_header('../campaignDescriptor.yaml')\n", "update_actris_header('../campaignDescriptor.yaml')\n",
"\n", "\n",
"month = \"2-3\"\n", "month = \"2-3\"\n",
@ -273,7 +267,7 @@
"outputs": [], "outputs": [],
"source": [ "source": [
"#path_to_data_file = '../data/CH0001G.20240201010000.20250519140310.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.2mo.1h.CH02L_Aerodyne_ToF-ACSM_017.CH02L_Aerodyne_ToF-ACSM_JFJ.lev2.nas'\n", "#path_to_data_file = '../data/CH0001G.20240201010000.20250519140310.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.2mo.1h.CH02L_Aerodyne_ToF-ACSM_017.CH02L_Aerodyne_ToF-ACSM_JFJ.lev2.nas'\n",
"path_to_data_file = '../data/CH0002G.20240201010000.20250526175557.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.7w.1h.CH02L_Aerodyne_ToF-ACSM_092.CH02L_Aerodyne_ToF-ACSM_PAY.lev2.nas'\n", "path_to_data_file = '../data/CH0001G.20240201010000.20250527075812.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.2mo.1h.CH02L_Aerodyne_ToF-ACSM_017.CH02L_Aerodyne_ToF-ACSM_JFJ.lev2.nas'\n",
"\n", "\n",
"drop_column_from_nas_file(path_to_data_file, column_to_remove='inletP')" "drop_column_from_nas_file(path_to_data_file, column_to_remove='inletP')"
] ]
@ -303,8 +297,10 @@
"metadata": {}, "metadata": {},
"outputs": [], "outputs": [],
"source": [ "source": [
"path_to_data_file = '../data/CH0002G.20240201010000.20250526175557.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.7w.1h.CH02L_Aerodyne_ToF-ACSM_092.CH02L_Aerodyne_ToF-ACSM_PAY.lev2.nas'\n", "path_to_data_file = '../data/CH0001G.20240201010000.20250527075812.aerosol_mass_spectrometer.chemistry_ACSM.pm1_non_refractory.2mo.1h.CH02L_Aerodyne_ToF-ACSM_017.CH02L_Aerodyne_ToF-ACSM_JFJ.lev2.nas'\n",
"adjust_uncertainty_column_in_nas_file(path_to_data_file, base_column_name='Org')" "#adjust_uncertainty_column_in_nas_file(path_to_data_file, base_column_name='Org')\n",
"variables = ['Org', 'NO3']\n",
"adjust_uncertainty_column_in_nas_file(path_to_data_file, base_column_names=variables)"
] ]
}, },
{ {