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WIP: Completed flag generation for species, command line interface is now clear but still does not consider potentially existing flags. Review TODO.md, for efficiency we need to simplify flag assignment and reconciliation for the species flag type.

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florez_j
2025-02-26 15:11:12 +01:00
parent 600c60be36
commit 33f29a8080
2 changed files with 221 additions and 111 deletions
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4
pipelines/steps/visualize_datatable_vars.py
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@ -49,8 +49,8 @@ def visualize_table_variables(data_file_path, dataset_name, flags_dataset_name,
var_flag_name = f"flag_{var}"
if var_flag_name in flags_df.columns:
# Identify valid and invalid indices
ind_valid = flags_df[var_flag_name].to_numpy()
ind_invalid = np.logical_not(ind_valid)
ind_invalid = flags_df[var_flag_name].to_numpy()
# ind_valid = np.logical_not(ind_valid)
# Detect start and end indices of invalid regions
# Find transition points in invalid regions
invalid_starts = np.diff(np.concatenate(([False], ind_invalid, [False]))).nonzero()[0][::2]