1064 lines
26 KiB
Plaintext
1064 lines
26 KiB
Plaintext
{
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"cells": [
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"# Import python packages and modules"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 8,
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"metadata": {},
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"outputs": [],
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"source": [
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"import sys\n",
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"import os\n",
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"# Set up project root directory\n",
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"root_dir = os.path.abspath(os.curdir)\n",
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"sys.path.append(root_dir)\n",
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"\n",
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"import src.hdf5_vis as hdf5_vis\n",
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"import src.hdf5_lib as hdf5_lib\n",
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"import input_files.config_file as config_file\n",
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"\n",
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"\n",
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"output_dir = 'output_files/'\n",
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"group_id = '5505'#'smog_chamber'#'5505'\n",
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"user_initials = 'LL' #'NG' #'LL' # 'TBR'\n",
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"\n",
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"group_id = 'smog_chamber'#'5505'\n",
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"user_initials = 'NG'#'LL' #'NG' #'LL' # 'TBR'\n"
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]
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},
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{
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"# Define input file path and keywords\n",
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"\n"
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]
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},
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{
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"cell_type": "code",
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"execution_count": 9,
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"metadata": {},
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"[==================================================--------------------------------------------------] 50.0% ...Uploading files in \\\\fs03\\Iron_Sulphate\\smps\\20220726\r"
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]
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},
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{
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"data": {
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"/gas",
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"/gas/20220726_000004_MSC_gases.txt",
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"/gas/20220726_000004_MSC_gases.txt/categorial_variable_names",
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"/gas/20220726_000004_MSC_gases.txt/categorical_variables",
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"/gas/20220726_000004_MSC_gases.txt/numerical_variable_names",
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"/gas/20220726_000004_MSC_gases.txt/numerical_variables",
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"/gas/20220726_101617_MSC_gases.txt",
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"/gas/20220726_101617_MSC_gases.txt/categorial_variable_names",
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"/gas/20220726_101617_MSC_gases.txt/categorical_variables",
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"/gas/20220726_101617_MSC_gases.txt/numerical_variable_names",
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"/gas/20220726_101617_MSC_gases.txt/numerical_variables",
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"/smps",
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"/smps/20220726",
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"/smps/20220726/20220726_mass.TXT",
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"/smps/20220726/20220726_mass.TXT/categorial_variable_names",
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"/smps/20220726/20220726_mass.TXT/categorical_variables",
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"/smps/20220726/20220726_mass.TXT/numerical_variable_names",
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"/smps/20220726/20220726_mass.TXT/numerical_variables",
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"/smps/20220726/20220726_num.TXT",
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"/smps/20220726/20220726_num.TXT/categorial_variable_names",
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"/smps/20220726/20220726_num.TXT/categorical_variables",
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}
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},
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"metadata": {},
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"output_type": "display_data"
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}
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],
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"source": [
|
|
"#input_file_dir = '//fs101/5505/People/Juan/TypicalBeamTime'\n",
|
|
"#select_file_keywords=[]\n",
|
|
"#select_dir_keywords = ['NEXAFS', 'Notes', 'Photos', 'Pressure', 'RGA', 'SES']\n",
|
|
"\n",
|
|
"\n",
|
|
"#input_file_dir = '//fs101/5505/Data' \n",
|
|
"#select_dir_keywords = ['Lopap', 'Humidity_Sensors/2022', 'ICAD/HONO/2022', 'ICAD/NO2/2022', 'T200_NOX', 'T360U_CO2']\n",
|
|
"#select_file_keywords = ['2022-03-25','2022_03_25','20220325']\n",
|
|
"\n",
|
|
"\n",
|
|
"input_file_dir = '//fs03/Iron_Sulphate'\n",
|
|
"select_dir_keywords = ['gas','smps/20220726']#,'htof/2022.07.26','ptr/2022.07.26','ams/2022.07.26']\n",
|
|
"#select_dir_keywords = ['htof','ams', 'ptr', 'gas','smps'] \n",
|
|
"\n",
|
|
"select_file_keywords = ['20220726','2022.07.26']\n",
|
|
"\n",
|
|
"config_param = {'group_id' : group_id, 'user_initials' : user_initials, 'output_dir': output_dir}\n",
|
|
"\n",
|
|
"\n",
|
|
"output_filename_path, output_yml_filename_path = hdf5_lib.create_hdf5_file_from_filesystem_path(config_param,\n",
|
|
" input_file_dir,\n",
|
|
" select_dir_keywords,\n",
|
|
" select_file_keywords)\n",
|
|
"\n",
|
|
"hdf5_vis.display_group_hierarchy_on_a_treemap(output_filename_path)"
|
|
]
|
|
},
|
|
{
|
|
"cell_type": "markdown",
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|
"metadata": {},
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|
"source": []
|
|
}
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],
|
|
"metadata": {
|
|
"kernelspec": {
|
|
"display_name": "test_atmos_chem_env",
|
|
"language": "python",
|
|
"name": "python3"
|
|
},
|
|
"language_info": {
|
|
"codemirror_mode": {
|
|
"name": "ipython",
|
|
"version": 3
|
|
},
|
|
"file_extension": ".py",
|
|
"mimetype": "text/x-python",
|
|
"name": "python",
|
|
"nbconvert_exporter": "python",
|
|
"pygments_lexer": "ipython3",
|
|
"version": "3.11.6"
|
|
}
|
|
},
|
|
"nbformat": 4,
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|
"nbformat_minor": 2
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}
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