Commit Graph

12 Commits

Author SHA1 Message Date
89e9dd9ab1 Fixed bugs in update_file() method and create_hdf5_file_from_filesystem_path() 2024-10-03 09:32:25 +02:00
9b5d777a5b Added .update_file() method, which enables complementary data structure updates to existing file with same name as append_dir's head. 2024-10-02 14:38:35 +02:00
4420f81642 Removed construct_attributes_dict(attrs_obj) and replaced by {key: utils.to_serializable_dtype(val) for key, val in obj.attrs.items()} 2024-10-01 10:42:20 +02:00
8cd4b7d925 Deleted annotate_root_dir(filename,annotation_dict: dict), and outsourced functionality to HDF5DataOpsManager.append_metadata() or .update_metadata() at obj_name = '/' 2024-10-01 09:19:14 +02:00
6f5d4adcee Implemented metadata append, rename, delete, and update operations on the hdf5 manager object and refactored metadata update script based on yaml file to use said operations. 2024-09-30 16:32:39 +02:00
96dad0bfb1 Renamed to_yaml() as serialize_metadata() and introduce input parameter output_format, which allows yaml or json. 2024-09-26 16:23:09 +02:00
85b0e5ab74 Performed a few function relocations and deletions from src/hdf5_lib.py into src/hdf5_ops.py and made a copy of previous version as src/hdf5_lib_part2.py 2024-09-26 15:13:31 +02:00
a92660049f Moved is_structured_array() and to_serializable_dtype() to utils, ranamed a few functions and propagated changes to dependent modules. 2024-09-26 14:03:11 +02:00
a57e46d89c Renamed take_yml_snapshot_of_hdf5_file func as to_yaml func 2024-09-25 16:49:44 +02:00
1e93a2c552 Moved take_yml_snapshot_of_hdf5_file func and associted helper functions from hdf5_vis.py into hdf5_ops.py 2024-09-25 16:40:16 +02:00
4974246522 move def get_parent_child_relationships(file: h5py.File) from ..._vis.py to ..._ops.py 2024-09-13 14:59:11 +02:00
b42482069c src/hdf5_data_extraction.py -> src/hdf5_ops.py 2024-09-13 14:55:12 +02:00