Added new method to retreive metadata from h5file at a given obj path
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@ -100,6 +100,19 @@ class HDF5DataOpsManager():
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annotation_dict[new_attr_key] = utils.parse_attribute(annotation_dict[new_attr_key])
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annotation_dict[new_attr_key] = utils.parse_attribute(annotation_dict[new_attr_key])
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obj.attrs.update(annotation_dict)
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obj.attrs.update(annotation_dict)
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def get_metadata(self, obj_path):
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""" Get file attributes from object at path = obj_path. For example,
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obj_path = '/' will get root level attributes or metadata.
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"""
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try:
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# Access the attributes for the object at the given path
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metadata_dict = self.file_obj[obj_path].attrs
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except KeyError:
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# Handle the case where the path doesn't exist
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logging.error(f'Invalid object path: {obj_path}')
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metadata_dict = {}
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return metadata_dict
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def reformat_datetime_column(self, dataset_name, column_name, src_format, desired_format='%Y-%m-%d %H:%M:%S.%f'):
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def reformat_datetime_column(self, dataset_name, column_name, src_format, desired_format='%Y-%m-%d %H:%M:%S.%f'):
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# Access the dataset
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# Access the dataset
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@ -165,11 +178,6 @@ def read_dataset_from_hdf5file(hdf5_file_path, dataset_path):
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#metadata_df = pd.DataFrame.from_dict(data, orient='columns')
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#metadata_df = pd.DataFrame.from_dict(data, orient='columns')
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return df
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return df
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def read_metadata_from_hdf5obj(hdf5_file_path, obj_path):
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# TODO: Complete this function
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metadata_df = pd.DataFrame.empty()
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return metadata_df
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def list_datasets_in_hdf5file(hdf5_file_path):
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def list_datasets_in_hdf5file(hdf5_file_path):
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def get_datasets(name, obj, list_of_datasets):
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def get_datasets(name, obj, list_of_datasets):
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