Added new instrument (flagging app) file reading capabilities. It includes two files a flag_reader.py that takes flag.json files produced by the app into a standard intermidiate representation, and a yaml file with instrument dependent description terms. Last, we modified the filereader_registry.py to find the new instrument file reader.

instruments/readers/filereader_registry.py

@@ -22,6 +22,11 @@ file_readers = {
     'ACSM_TOFWARE_csv': lambda a1: read_txt_files_as_dict(a1, instruments_dir=default_instruments_dir, work_with_copy=False)
 }
 
+# Add new "instrument reader (Data flagging app data)"
+from instruments.readers.flag_reader import read_jsonflag_as_dict
+file_extensions.append('.json') 
+file_readers.update({'ACSM_TOFWARE_flags_json' : lambda x: read_jsonflag_as_dict(x)})
+
 def compute_filereader_key_from_path(hdf5_file_path):
     """Constructs the key 'instrumentname_ext' based on hdf5_file_path, structured as
     /instrumentname/to/filename.ext, which access the file reader that should be used to read such a file.